RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 COL5A3P25940 1745 aaPredicted RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 HIST1H1CP16403 213 aaKnown RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 LDLRAD3Q86YD5 345 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 ZNF107Q9UII5 783 aaPredicted RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 H3BP45 60 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SRSF10O75494 262 aaKnown RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 PATE1Q8WXA2 126 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 MORN3Q6PF18 240 aaPredicted RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 HAPLN2Q9GZV7 340 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 IGSF5Q9NSI5 407 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 A0A1B0GWB2 263 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 ID3Q02535 119 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SS18Q15532 418 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 DMRTA1Q5VZB9 504 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 C20orf204Q6ZNR8 217 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 ZDHHC22Q8N966 263 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 TXNDC17Q9BRA2 123 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 ALX3O95076 343 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 EMDP50402 254 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 TMEM136Q6ZRR5 245 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 PXMP4Q9Y6I8 212 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 ARAP2Q8WZ64 1704 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 TMEM129A0AVI4 362 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 MBLAC1A4D2B0 266 aaPredicted RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 MOSPD3O75425 235 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SEC61GP60059 68 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 OR10AG1Q8NH19 301 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 NUBPLQ8TB37 319 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 GP6Q9HCN6 339 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SAXO2Q658L1 398 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 FAM214BQ7L5A3 538 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 NPVFQ9HCQ7 196 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 KCNE5Q9UJ90 142 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 MLNRO43193 412 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SPACA5Q96QH8 159 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 PMCHL2Q9BQD1 86 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 OVOL2Q9BRP0 275 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 VN1R1Q9GZP7 353 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 CCSO14618 274 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 UBE2BP63146 152 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SRSF1Q07955 248 aaKnown RBP eCLIP2.99□□□□□ -1.93
NEB-201ENST00000172853 TEX38Q6PEX7 206 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 PRSS42Q7Z5A4 293 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 DMRTA2Q96SC8 542 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 MS4A6AQ9H2W1 248 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 RNASE4P34096 147 aaKnown RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 SPINK9Q5DT21 86 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 DNAJC30Q96LL9 226 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 IFT22Q9H7X7 185 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 TCF21O43680 179 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 B2MP61769 119 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SRSF6Q13247 344 aaKnown RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 LCN12Q6JVE5 192 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 VGLL2Q8N8G2 317 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 LRTM2Q8N967 370 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 LGALS1P09382 135 aaKnown RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 ZNF146Q15072 292 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 RNF182Q8N6D2 247 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 TTTY12Q9BZ98 90 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 BEX4Q9NWD9 120 aaPredicted RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 FAM206AQ9NX38 181 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 LRP12Q9Y561 859 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 LOC285556D6RIA3 1793 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 Q6ZS52 159 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 KLF12Q9Y4X4 402 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 LY75O60449 1722 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 CST7O76096 145 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 PSG2P11465 335 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 PRSS36Q5K4E3 855 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 TMEM91Q6ZNR0 172 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 PCM1Q15154 2024 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 H3BMH7 237 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 DUTP33316 252 aaKnown RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 ITLN1Q8WWA0 313 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SMIM19Q96E16 107 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SMIM2Q9BVW6 85 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 TEX101Q9BY14 249 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 FLRT3Q9NZU0 649 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 DOCK1Q14185 1865 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 SAA1P0DJI8 122 aaPredicted RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 TIAL1Q01085 375 aaKnown RBP eCLIP2.99□□□□□ -1.93
NEB-201ENST00000172853 PNRC1Q12796 327 aaPredicted RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 PQLC2Q6ZP29 291 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 LRRC75AQ8NAA5 344 aa2.99□□□□□ -1.93
NEB-201ENST00000172853 TMEFF2Q9UIK5 374 aaPredicted RBP2.99□□□□□ -1.93
NEB-201ENST00000172853 CTSVO60911 334 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 CCL2P13500 99 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 LSM6P62312 80 aaKnown RBP2.98□□□□□ -1.93
NEB-201ENST00000172853 MBNL2Q5VZF2 373 aaKnown RBP2.98□□□□□ -1.93
NEB-201ENST00000172853 RASL11AQ6T310 242 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 PNKDQ8N490 385 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 CHD5Q8TDI0 1954 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 SLC25A16P16260 332 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 PFN3P60673 137 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 ERVS71-1P61550 626 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 FAM181AQ8N9Y4 354 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 OR5AU1Q8NGC0 362 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 LINC01560Q8TB33 94 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 NHSQ6T4R5 1651 aa2.98□□□□□ -1.93
NEB-201ENST00000172853 ADAMTS7Q9UKP4 1686 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms