RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 KRBOX1C9JBD0 128 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 SHOXO15266 292 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 SLC31A2O15432 143 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 KRASP01116 189 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 G6PCP35575 357 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 SULT1A1P50225 295 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 RPL31P62899 125 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 HFEQ30201 348 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 OR2B11Q5JQS5 317 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 UQCC3Q6UW78 93 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 HEPN1Q6WQI6 88 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 SLC25A48Q6ZT89 311 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 STPG2Q8N412 459 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 OR1S2Q8NGQ3 325 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 MARC2Q969Z3 335 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF251Q9BRH9 671 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 PRELID3BQ9Y3B1 194 aa11.79□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF705EA8MWA4 302 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 ZG16O60844 167 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 DAOP14920 347 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 ZP3P21754 424 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 RAB5CP51148 216 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 BLOC1S1P78537 153 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 TNFRSF9Q07011 255 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 RPL39P5Q59GN2 51 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 UTF1Q5T230 341 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 TMEM200BQ69YZ2 307 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 H2BFWTQ7Z2G1 175 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 STX12Q86Y82 276 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 PARP11Q9NR21 331 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 ARFGEF3Q5TH69 2177 aa11.78□□□□□ -0.52
RTFDC1-201ENST00000023939 FBXO24O75426 580 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 DFFBO76075 338 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 THBS3P49746 956 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 UBE2KP61086 200 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF273Q14593 569 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 LYPD2Q6UXB3 125 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 C8orf31Q8N9H6 132 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 OR5C1Q8NGR4 320 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 R3HDM4Q96D70 268 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 ZNF714Q96N38 554 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 S1PR3Q99500 378 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 CTSZQ9UBR2 303 aa11.77□□□□□ -0.52
RTFDC1-201ENST00000023939 SAA2-SAA4A0A096LPE2 208 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 MARCH11A6NNE9 402 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 DVL1O14640 695 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 FCGR3BO75015 233 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 MMP23AO75900 390 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 NXPH3O95157 252 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 LY86O95711 162 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 DANCRP0C864 163 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 SAA2P0DJI9 122 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 DYNLT3P51808 116 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 LINC00205P59089 165 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 MRPS11P82912 194 aaKnown RBP11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 PRAMEF5Q5TYX0 476 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 IL34Q6ZMJ4 242 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 LYPD6BQ8NI32 183 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 ATP5SQ99766 215 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 MMP26Q9NRE1 261 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 CBLN4Q9NTU7 201 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 PSENENQ9NZ42 101 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 CACFD1Q9UGQ2 172 aa11.77□□□□□ -0.53
RTFDC1-201ENST00000023939 USF3Q68DE3 2245 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 TRBV23-1A0A0A0MS06 115 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 B8ZZF3 427 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 CST7O76096 145 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 NFYBP25208 207 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 OR4S2Q8NH73 311 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 ZNF596Q8TC21 504 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 RAB39BQ96DA2 213 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 RBKSQ9H477 322 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 ATRXP46100 2492 aa11.76□□□□□ -0.53
RTFDC1-201ENST00000023939 TEX46H3BTG2 121 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 DLX6P56179 175 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 CLINT1Q14677 625 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 PXDC1Q5TGL8 231 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 C11orf71Q6IPW1 123 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 BTNL8Q6UX41 500 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 TMEM14EPQ6UXP3 125 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 ITLN2Q8WWU7 325 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 GNPNAT1Q96EK6 184 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 CIB3Q96Q77 187 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 RAB1BQ9H0U4 201 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 STRAPQ9Y3F4 350 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 HCFC1P51610 2035 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 ROS1P08922 2347 aa11.75□□□□□ -0.53
RTFDC1-201ENST00000023939 A0A087X0M5 115 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 A0A1B0GX30 115 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 TRIM77I1YAP6 450 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 GPR37O15354 613 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 IGHV3-7P01780 117 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 IGHV2-70P01814 119 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 IAPPP10997 89 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms