RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Klhdc2Q4G5Y1 406 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 RasefQ5RI75 627 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Odf1Q61999 247 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Il31Q6EAL8 163 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Znf182Q6P560 627 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Zfp157Q6PCM4 567 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Rnf220Q6PDX6 566 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Eri1Q7TMF2 345 aaKnown RBP5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1219Q7TR04 311 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1115Q7TR53 326 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr657Q7TRP7 319 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Psg22Q810J1 475 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Lmf2Q8C3X8 702 aaKnown RBP5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Zbtb26Q8C8S0 451 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Fn3krpQ8K274 309 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1484Q8VEU6 315 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1323Q8VF35 309 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr507Q8VG13 316 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 SncbQ91ZZ3 133 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Ucn2Q99ML8 113 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Exosc5Q9CRA8 235 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gdpd1Q9CRY7 314 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 ManfQ9CXI5 179 aaKnown RBP5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Q9DAL9 119 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gk2Q9WU65 554 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Dctn3Q9Z0Y1 186 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 H2afb1S4R1E0 115 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 H2afb3S4R1G7 115 aa5.95□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1493-ps1A0A140LHU2 316 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gm45844A0A1B0GRQ2 137 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1223A0A1L1SU13 311 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1123A2AT85 323 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gm15293D3YX02 93 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gm6614M0QWR8 670 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Hsd17b10O08756 261 aaKnown RBP5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Rnf13O54965 381 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr143P34985 313 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Il11P47873 199 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Rpl6P47911 296 aaKnown RBP5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Cd7P50283 210 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 SnrpgP62309 76 aaKnown RBP5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Prrx1P63013 245 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 S100gP97816 79 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1136Q0VBI4 310 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gm11110Q3U4K9 109 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Ms4a15Q3UPL6 245 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Spsb3Q571F5 354 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Laptm4aQ60961 233 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Foxf1Q61080 378 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Ewsr1Q61545 655 aaKnown RBP5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Hes3Q61657 175 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr876Q7TRE4 310 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr304Q7TS03 333 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Slc38a1Q8K2P7 485 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Zmynd11Q8R5C8 602 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1143Q8VEU8 314 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1138Q8VFQ9 311 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr561Q8VGZ6 314 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 B3gnt9Q8VI16 399 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 SostQ99P68 211 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Efcab11Q9D0E5 162 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Snu13Q9D0T1 128 aaKnown RBP5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Tmem210Q9D2F0 147 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Prss37Q9DAA4 237 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Iqcf5Q9DAL7 148 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Hmgn3Q9DCB1 99 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gstk1Q9DCM2 226 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Dap3Q9ER88 391 aaKnown RBP5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Ube2j1Q9JJZ4 318 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Tmem176bQ9R1Q6 263 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Kcnk7Q9Z2T1 307 aa5.94□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gm28557A0A087WQQ0 336 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Gm21865A0A087WRL2 222 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Trbv23A0A0A6YWQ1 115 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1157A2AVC4 312 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Btbd16E9Q173 522 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 S100a2J3QMC7 104 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr597L7N224 315 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 P01759 136 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 CrygdP04342 174 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Lyz1P17897 148 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Cdc25bP30306 576 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Tfap2aP34056 437 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Cdc42P60766 191 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 CrygeQ03740 174 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Cnn1Q08091 297 aaKnown RBP5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Arhgef39Q66JY6 344 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Polr2mQ6P6I6 366 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Myl12aQ6ZWQ9 172 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Slc22a18Q78KK3 406 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Mtch1Q791T5 389 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Pramel5Q7TPY4 500 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr453Q7TRV7 317 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Kctd7Q8BJK1 289 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Tmem222Q8BVA2 208 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Ptges2Q8BWM0 384 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Dnajc22Q8CHS2 339 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Hus1bQ8K572 276 aa5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Mbnl3Q8R003 342 aaKnown RBP5.93□□□□□ -1.46
Scn8a-207ENSMUST00000200959 Olfr1461Q8VEV7 312 aa5.93□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms