RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Olfr180Q7TS48 317 aa20.58■□□□□ 0.89
Sh3rf1-201ENSMUST00000034060 Lrp5Q91VN0 1614 aa20.58■□□□□ 0.89
Sh3rf1-201ENSMUST00000034060 Olfr1118A0A0J9YUE7 307 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Olfr204E9Q8M0 305 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 P01644 108 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 P01645 108 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 P01646 108 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 P01647 108 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Neil2Q6R2P8 329 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Rbfox1Q9JJ43 396 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Slc37a2Q9WU81 501 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Gm20918J3QN17 227 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 PpiaP17742 164 aaKnown RBP20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Rnf133Q14B02 382 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Mrpl13Q9D1P0 178 aaKnown RBP20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Wdr20Q9D5R2 567 aa20.58■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Cldn34c2J3QNM1 233 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Vmn1r170K7N6W9 304 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ifna4P07351 186 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 B4galnt1Q09200 533 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Gpr183Q3U6B2 357 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Plpp1Q61469 283 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Cldn34c1Q8K193 234 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ankrd31A0A140LI88 1765 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Trav8n-2A0A075B633 112 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ajap1A2ALI5 412 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Prrt2E9PUL5 346 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Tmem71Q149F5 287 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 BC147527Q3V185 167 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Psg19Q4KL31 475 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Mia3Q8BI84 1930 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 VirmaA2AIV2 1811 aaKnown RBP20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 PrnA0A075B668 197 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Pusl1A2ADA5 291 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Klk1b1P00755 261 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Il4P07750 140 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ccl5P30882 91 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Bmpr1bP36898 502 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Harbi1Q8BR93 349 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ccdc198Q9CPZ1 294 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ldb3Q9JKS4 723 aaKnown RBP20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Igkv16-104A0A0B4J1I1 116 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Rbm24D3Z4I3 236 aaKnown RBP20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Gdf1P20863 357 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Guca2aP33680 116 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Aqp3Q8R2N1 292 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Cmtm2bQ9DAC0 210 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Klf5Q9Z0Z7 446 aaKnown RBP20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Tcrg-V7A0A0A6YYE8 116 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Bud31Q6PGH1 103 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Exosc2Q8VBV3 293 aaKnown RBP20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Olfr492Q8VFD1 314 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Olfr1239Q8VGM8 305 aa20.57■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Fabp6P51162 128 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 ArsgQ3TYD4 525 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Thap4Q6P3Z3 569 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ifna14Q810G3 189 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ikzf4Q8C208 586 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Olfr1324Q8VEU7 332 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Tmem107Q9CPV0 140 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Mcpt9O35164 246 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ucp3P56501 308 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 FusP56959 518 aaKnown RBP20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Cbln4Q8BME9 198 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Olfr1447Q8VFX3 309 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Olfr1446Q8VFX4 308 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Gpx2Q9JHC0 190 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Olfr1220F7BL62 311 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Pafah1b2Q61206 229 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Dnd1Q6VY05 352 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Pld4Q8BG07 503 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Dhrs7cQ8CHS7 311 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Bcl2l10Q9Z0F3 191 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Zfp931A2AHM2 298 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Cryba1P02525 198 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Sult1a1P52840 291 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 RhodP97348 210 aa20.56■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Gm28171A0A087WQ19 227 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 St3gal2Q11204 350 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 TecrQ9CY27 308 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ethe1Q9DCM0 254 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Zbtb34A2ATY4 518 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Fgf8P37237 268 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ppp2cbP62715 309 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ppp2caP63330 309 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Aqp6Q8C4A0 293 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Fam166aQ9D4K5 319 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Wdr5bQ9D7H2 328 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 P01735 133 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Pip5k1aP70182 546 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Lefty1Q64280 368 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Vmn1r89Q8R256 316 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Vmn1r179Q8R2B4 323 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Nup188Q6ZQH8 1759 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Gm21943Q5FWD5 227 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Ankrd34cQ8BLB8 534 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 YbeyQ8CAV0 164 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Pnpla3Q91WW7 413 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 Fbxo24Q9D417 589 aa20.55■□□□□ 0.88
Sh3rf1-201ENSMUST00000034060 PrndQ9QUG3 179 aa20.55■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms