RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TMEM14EPQ6UXP3 125 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 GATAD1Q8WUU5 269 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 P2RX4Q99571 388 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 USF3Q68DE3 2245 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 ASPMQ8IZT6 3477 aa11.64□□□□□ -0.55
PHGDH-233ENST00000642021 G6PCP35575 357 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 BRWD1-AS2P59051 145 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 OR1L1Q8NH94 360 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 SLC39A9Q9NUM3 307 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 WIPI2Q9Y4P8 454 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 SPENQ96T58 3664 aaKnown RBP11.63□□□□□ -0.55
PHGDH-233ENST00000642021 LRP5LA4QPB2 252 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 NXPH2O95156 264 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 TFF1P04155 84 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 LINC00205P59089 165 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 TNFRSF9Q07011 255 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 ACSF3Q4G176 576 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-233ENST00000642021 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-233ENST00000642021 TGIF2LXQ8IUE1 241 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 SNX22Q96L94 193 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 RTL8AQ9BWD3 113 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 STRADBQ9C0K7 418 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 DEFB127Q9H1M4 99 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 CLN8Q9UBY8 286 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 KMT2EQ8IZD2 1858 aa11.63□□□□□ -0.55
PHGDH-233ENST00000642021 TRBV24-1A0A075B6N3 115 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 PIGBOS1A0A0B4J2F0 54 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 OR5H1A6NKK0 313 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 GRPP07492 148 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 MEOX1P50221 254 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 ZNF816Q0VGE8 651 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 ZNF146Q15072 292 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 FBXW9Q5XUX1 488 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 MOB1BQ7L9L4 216 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 ZNF808Q8N4W9 903 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 DSPP15924 2871 aaKnown RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 MARCH11A6NNE9 402 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 PTBP3O95758 552 aaKnown RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 DEFA4P12838 97 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 HIST1H1BP16401 226 aaKnown RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 ADIRFQ15847 76 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 NECAP1Q8NC96 275 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 OR52L2PQ8NGH6 319 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 PINX1Q96BK5 328 aaKnown RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 SMIM7Q9BQ49 75 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 SLC25A22Q9H936 323 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 DOCK11Q5JSL3 2073 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 OR3A1P47881 315 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 MEF2BQ02080 365 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 GAMTQ14353 236 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 SAPCD1Q5SSQ6 148 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 CXorf67Q86X51 503 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 OR4X1Q8NH49 305 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 RPUSD4Q96CM3 377 aaKnown RBP11.62□□□□□ -0.55
PHGDH-233ENST00000642021 OR2D2Q9H210 308 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 IL17BQ9UHF5 180 aa11.62□□□□□ -0.55
PHGDH-233ENST00000642021 WNT9BO14905 357 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 SMPD2O60906 423 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 OPN1MWP04001 364 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 PFN1P07737 140 aaKnown RBP11.61□□□□□ -0.55
PHGDH-233ENST00000642021 SP1P08047 785 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 OPN1MW2P0DN77 364 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 OPN1MW3P0DN78 364 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 GZMHP20718 246 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 CLEC12BQ2HXU8 276 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 RNFT1Q5M7Z0 435 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 ZNF826PQ6ZT77 177 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 C16orf82Q7Z2V1 217 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 PARD6GQ9BYG4 376 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-233ENST00000642021 CDH20Q9HBT6 801 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 HSPB7Q9UBY9 170 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 NCOR1O75376 2440 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 ELOA3CA0A087WX78 387 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-233ENST00000642021 ODAMA1E959 279 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 PMS2P5A8MQ11 134 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 C12orf77C9JDV5 145 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 SH2D1BO14796 132 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 P0C879 139 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 IDH3GP51553 393 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-233ENST00000642021 RTP5Q14D33 572 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 CDX2Q99626 313 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-233ENST00000642021 HIST1H2BLQ99880 126 aa11.61□□□□□ -0.55
PHGDH-233ENST00000642021 PRR14LQ5THK1 2151 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 TMEM265A0A087WTH1 108 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 C17orf98A8MV24 154 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 ZG16O60844 167 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 S1PR2O95136 353 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 PPP1CBP62140 327 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 RPL23P62829 140 aaKnown RBP11.6□□□□□ -0.55
PHGDH-233ENST00000642021 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 ZNF766Q5HY98 468 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 NCR3LG1Q68D85 454 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 Q6ZR03 302 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 CENPVQ7Z7K6 275 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-233ENST00000642021 SLC25A40Q8TBP6 338 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 NAT8Q9UHE5 227 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 POLDIP2Q9Y2S7 368 aa11.6□□□□□ -0.55
PHGDH-233ENST00000642021 ZFHX4Q86UP3 3567 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms