RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PITPNAQ00169 270 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 MED22Q15528 200 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 ACTBL2Q562R1 376 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 OGFRL1Q5TC84 451 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-213ENST00000641272 LFNGQ8NES3 379 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 OR6M1Q8NGM8 313 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 PHYHIPQ92561 330 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 TMEM203Q969S6 136 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 GFI1Q99684 422 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 RSRP1Q9BUV0 290 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-213ENST00000641272 PLGRKTQ9HBL7 147 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 LSM2Q9Y333 95 aaKnown RBP12.88□□□□□ -0.35
PHGDH-213ENST00000641272 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
PHGDH-213ENST00000641272 DNAH7Q8WXX0 4024 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 PTGES3LE9PB15 166 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 C3orf84H3BNL1 204 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 BPNT1O95861 308 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 IGKV1-16P04430 117 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 SCTP09683 121 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 CPEP16870 476 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 PSG5Q15238 335 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 LIPKQ5VXJ0 399 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 ACSM6Q6P461 480 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 MS4A15Q8N5U1 240 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 TCTEX1D1Q8N7M0 179 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 OR6Q1Q8NGQ2 317 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 MUC7Q8TAX7 377 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 AGMATQ9BSE5 352 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 NUBP2Q9Y5Y2 271 aa12.87□□□□□ -0.35
PHGDH-213ENST00000641272 SLC25A17O43808 307 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 TRGV3P03979 118 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 UCHL1P09936 223 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 OR8U9P0C7N5 309 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 SRMP19623 302 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 CEACAM6P40199 344 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 CLDN12P56749 244 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
PHGDH-213ENST00000641272 SPHARQ15513 63 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 ZNF383Q8NA42 475 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 OR5AN1Q8NGI8 311 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 UFD1Q92890 307 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 C12orf4Q9NQ89 552 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 GAR1Q9NY12 217 aaKnown RBP12.86□□□□□ -0.35
PHGDH-213ENST00000641272 RYR2Q92736 4967 aa12.86□□□□□ -0.35
PHGDH-213ENST00000641272 RBBP9O75884 186 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 HSMCR30P0CW71 290 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 MC5RP33032 325 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 VEGFCP49767 419 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 RPS16P62249 146 aaKnown RBP12.85□□□□□ -0.35
PHGDH-213ENST00000641272 TMEM267Q0VDI3 215 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-213ENST00000641272 PYHIN1Q6K0P9 492 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 CD200R1LQ6Q8B3 271 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 EDARADDQ8WWZ3 215 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 ARHGAP5-AS1Q96IT6 56 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 OR4C12Q96R67 309 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 URM1Q9BTM9 101 aaKnown RBP12.85□□□□□ -0.35
PHGDH-213ENST00000641272 GHITMQ9H3K2 345 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 ZNF355PQ9NSJ1 428 aa12.85□□□□□ -0.35
PHGDH-213ENST00000641272 AK6Q9Y3D8 172 aaKnown RBP12.85□□□□□ -0.35
PHGDH-213ENST00000641272 TRBV6-6A0A0A6YYG2 114 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 IGKV1-6A0A0C4DH72 117 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 M0R1X1 148 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 CASQ2O14958 399 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-213ENST00000641272 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
PHGDH-213ENST00000641272 PROP1O75360 226 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 APOA2P02652 100 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 CD3GP09693 182 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 ARSBP15848 533 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 ZBTB25P24278 435 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 PLA2G7Q13093 441 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 RAB11BQ15907 218 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 CASC10Q5T4H9 136 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 CMSS1Q9BQ75 279 aaKnown RBP12.84□□□□□ -0.35
PHGDH-213ENST00000641272 PECRQ9BY49 303 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 Q9N2K0 584 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 ZNF221Q9UK13 617 aa12.84□□□□□ -0.35
PHGDH-213ENST00000641272 SACSQ9NZJ4 4579 aa12.83□□□□□ -0.35
PHGDH-213ENST00000641272 ANKRD34BA5PLL1 514 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 FOXI3A8MTJ6 420 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-213ENST00000641272 ANKRD65E5RJM6 399 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 SLC17A2O00624 439 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 HSPB1P04792 205 aaKnown RBP12.83□□□□□ -0.36
PHGDH-213ENST00000641272 TFAP2AP05549 437 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 FXYD3Q14802 87 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 TMEM91Q6ZNR0 172 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 FLYWCH2Q96CP2 140 aaKnown RBP12.83□□□□□ -0.36
PHGDH-213ENST00000641272 TSNAXQ99598 290 aaKnown RBP12.83□□□□□ -0.36
PHGDH-213ENST00000641272 VCXQ9H320 206 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-213ENST00000641272 SLC35D1Q9NTN3 355 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 RDH8Q9NYR8 311 aa12.83□□□□□ -0.36
PHGDH-213ENST00000641272 ITGB1BP1O14713 200 aa12.82□□□□□ -0.36
PHGDH-213ENST00000641272 SPDEFO95238 335 aa12.82□□□□□ -0.36
PHGDH-213ENST00000641272 TMEM50BP56557 158 aa12.82□□□□□ -0.36
PHGDH-213ENST00000641272 SSBP2P81877 361 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-213ENST00000641272 PJVKQ0ZLH3 352 aa12.82□□□□□ -0.36
PHGDH-213ENST00000641272 AKIRIN2Q53H80 203 aa12.82□□□□□ -0.36
PHGDH-213ENST00000641272 PLAC9Q5JTB6 97 aa12.82□□□□□ -0.36
PHGDH-213ENST00000641272 ZFAND6Q6FIF0 208 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms