RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 ATG101Q9BSB4 218 aa11.55□□□□□ -0.56
PAX6-280ENST00000640872 LINC00470Q9BZP3 86 aa11.55□□□□□ -0.56
PAX6-280ENST00000640872 KIR2DL5BA0A0G2JN68 375 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 KIR2DL5BA0A0G2JPC4 375 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 GALR2O43603 387 aaPredicted RBP11.54□□□□□ -0.56
PAX6-280ENST00000640872 PAGE4O60829 102 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 WDR1O75083 606 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 MRPL33O75394 65 aaKnown RBP11.54□□□□□ -0.56
PAX6-280ENST00000640872 IL3RAP26951 378 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 ERVFC1-1P60608 527 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 FFAR4Q5NUL3 377 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 C1orf194Q5T5A4 169 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 KCNIP4Q6PIL6 250 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 ZNF573Q86YE8 665 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 KIR2DL5AQ8N109 375 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 OR2Y1Q8NGV0 311 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 PRRC2CQ9Y520 2896 aaKnown RBP11.54□□□□□ -0.56
PAX6-280ENST00000640872 IGKV3D-15A0A087WSY6 115 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 OR5B21A6NL26 309 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 C1QTNF9BB2RNN3 333 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 TRAPPC6AO75865 159 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 P0C879 139 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 TDGF1P13385 188 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 FOXG1P55316 489 aaPredicted RBP11.54□□□□□ -0.56
PAX6-280ENST00000640872 TMEM144Q7Z5S9 345 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 PRR18Q8N4B5 295 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 WFIKKN1Q96NZ8 548 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 FKBP11Q9NYL4 201 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 PLA2G3Q9NZ20 509 aa11.54□□□□□ -0.56
PAX6-280ENST00000640872 POLR3KQ9Y2Y1 108 aaPredicted RBP11.54□□□□□ -0.56
PAX6-280ENST00000640872 RBM7Q9Y580 266 aaKnown RBP11.54□□□□□ -0.56
PAX6-280ENST00000640872 A0A1W2PR80 420 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 RHBDL1O75783 438 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 COX5AP20674 150 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 GFRA1P56159 465 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 GNG3P63215 75 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 TFF3Q07654 80 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 FAM78BQ5VT40 261 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 ZNF497Q6ZNH5 498 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 POM121L2Q96KW2 1035 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 TMEM68Q96MH6 324 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 PKIBQ9C010 78 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 MPC1Q9Y5U8 109 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 TECTAO75443 2155 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 TMEM210A6NLX4 147 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 CD99P14209 185 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 CHRNA7P36544 502 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 LINC01551Q86U37 167 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 UBALD2Q8IYN6 164 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 UBALD1Q8TB05 177 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 IFI44Q8TCB0 444 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 NPCDR1Q9BY65 106 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 DEPPQ9NTK1 212 aa11.53□□□□□ -0.56
PAX6-280ENST00000640872 FRYQ5TBA9 3013 aa11.52□□□□□ -0.56
PAX6-280ENST00000640872 ANKRD30BLA7E2S9 258 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 M0R143 59 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 TMPRSS2O15393 492 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 CCL4P13236 92 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 CASP6P55212 293 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 LPAL2Q16609 132 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 VWC2Q2TAL6 325 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 IER2Q9BTL4 223 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 CLN8Q9UBY8 286 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 MRPS18CQ9Y3D5 142 aaKnown RBP11.52□□□□□ -0.57
PAX6-280ENST00000640872 PXMP4Q9Y6I8 212 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 LOC400499M0QZD8 3231 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 A0A1B0GWJ7 208 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 PINLYPA6NC86 204 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 RNF212BA8MTL3 300 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 C11orf94C9JXX5 98 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 SCGB1D1O95968 90 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 RAB4AP20338 218 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 GDF1P27539 372 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 TDGF1P3P51864 188 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 PPP1CBP62140 327 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 PMP22Q01453 160 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 WDYHV1Q96HA8 205 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 IMMP2LQ96T52 175 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.57
PAX6-280ENST00000640872 TRAPPC2LQ9UL33 140 aa11.52□□□□□ -0.57
PAX6-280ENST00000640872 FREM1Q5H8C1 2179 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 ARHGAP21Q5T5U3 1957 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 ODAMA1E959 279 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 J3QT63 122 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 RAMP3O60896 148 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 SYNGR4O95473 234 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 MPLP40238 635 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 IGFBP7Q16270 282 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 TMEM256Q8N2U0 113 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 OR1L1Q8NH94 360 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 NAGKQ9UJ70 344 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 TRAPPC1Q9Y5R8 145 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 TTC28Q96AY4 2481 aa11.51□□□□□ -0.57
PAX6-280ENST00000640872 A0A1B0GUS0 222 aa11.5□□□□□ -0.57
PAX6-280ENST00000640872 LRRC30A6NM36 301 aa11.5□□□□□ -0.57
PAX6-280ENST00000640872 SIRPB1O00241 398 aa11.5□□□□□ -0.57
PAX6-280ENST00000640872 NUPR1O60356 82 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms