RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 VSIRQ9H7M9 311 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 KIAA2026Q5HYC2 2103 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 LOC102723971A0A1B0GUV8 181 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 PRRG2O14669 202 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 S100A8P05109 93 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 OR8U8P0C7N1 319 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 IGHV1-2P23083 117 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 UBE2KP61086 200 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 ACSF3Q4G176 576 aaPredicted RBP12.84□□□□□ -0.35
PAX6-271ENST00000640431 KHDC3LQ587J8 217 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 GCNT2Q8N0V5 402 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 SLC25A40Q8TBP6 338 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 BCL2L14Q9BZR8 327 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 SEBOXQ9HB31 216 aaPredicted RBP12.84□□□□□ -0.35
PAX6-271ENST00000640431 RPRMQ9NS64 109 aa12.84□□□□□ -0.35
PAX6-271ENST00000640431 SPTAN1Q13813 2472 aaKnown RBP12.83□□□□□ -0.35
PAX6-271ENST00000640431 A0A087WWC5 75 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 CCL21O00585 134 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 SH2D1BO14796 132 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.36
PAX6-271ENST00000640431 RBPJQ06330 500 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.36
PAX6-271ENST00000640431 CDSNQ15517 529 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 SLC16A13Q7RTY0 426 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 C1QL4Q86Z23 238 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 C9orf106Q8NAJ2 232 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 SCGB1C1Q8TD33 95 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 GMPPAQ96IJ6 420 aaPredicted RBP12.83□□□□□ -0.36
PAX6-271ENST00000640431 CDH20Q9HBT6 801 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 IQCF6A8MYZ5 107 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 LYZL6O75951 148 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 SMIM6P0DI80 62 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 NQO2P16083 231 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 CD200P41217 278 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 CA7P43166 264 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 S100A12P80511 92 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 PSG7Q13046 419 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 ZNF726P1Q15940 193 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 SSX7Q7RTT5 188 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 NANPQ8TBE9 248 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 TVP23CQ96ET8 276 aa12.83□□□□□ -0.36
PAX6-271ENST00000640431 NBPF19A0A087WUL8 3843 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 PSPNO60542 156 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 HAND1O96004 215 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 GRPP07492 148 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 RAC2P15153 192 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 UBE2NP61088 152 aaKnown RBP12.82□□□□□ -0.36
PAX6-271ENST00000640431 FOXF2Q12947 444 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 LRRC75BQ2VPJ9 315 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 C1orf185Q5T7R7 199 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 ZNF343Q6P1L6 599 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 GNG13Q9P2W3 67 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 MMP24Q9Y5R2 645 aa12.82□□□□□ -0.36
PAX6-271ENST00000640431 INTS1Q8N201 2190 aaKnown RBP12.82□□□□□ -0.36
PAX6-271ENST00000640431 AP4M1O00189 453 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 IFNA17P01571 189 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 MPV17P39210 176 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
PAX6-271ENST00000640431 FGFRL1Q8N441 504 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 Q8WTZ3 238 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 PSMG3Q9BT73 122 aaPredicted RBP12.81□□□□□ -0.36
PAX6-271ENST00000640431 ZNF665Q9H7R5 613 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 J3QKU1 62 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 PPIHO43447 177 aaKnown RBP12.81□□□□□ -0.36
PAX6-271ENST00000640431 RPS10P46783 165 aaKnown RBP12.81□□□□□ -0.36
PAX6-271ENST00000640431 ADORA2A-AS1P86434 159 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 ELOBQ15370 118 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 GABRA6Q16445 453 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 SPANXN5Q5MJ07 72 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 ZNF787Q6DD87 383 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
PAX6-271ENST00000640431 SLC35E3Q7Z769 313 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 LILRB2Q8N423 598 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 OR10G4Q8NGN3 311 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 OR1L1Q8NH94 360 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 C5orf30Q96GV9 206 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 HES4Q9HCC6 221 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 CLCF1Q9UBD9 225 aa12.81□□□□□ -0.36
PAX6-271ENST00000640431 CHD3Q12873 2000 aaKnown RBP12.8□□□□□ -0.36
PAX6-271ENST00000640431 ZFP92A6NM28 416 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 ZG16O60844 167 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 CXCL1P09341 107 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
PAX6-271ENST00000640431 FGF8P55075 233 aaPredicted RBP12.8□□□□□ -0.36
PAX6-271ENST00000640431 B2MP61769 119 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 HBG1P69891 147 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 HBG2P69892 147 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 FAM90A2PQ658T7 463 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 LCN15Q6UWW0 184 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 CXorf67Q86X51 503 aaPredicted RBP12.8□□□□□ -0.36
PAX6-271ENST00000640431 ZNF645Q8N7E2 425 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 MBD3L1Q8WWY6 194 aa12.8□□□□□ -0.36
PAX6-271ENST00000640431 RCC1LQ96I51 464 aaKnown RBP12.8□□□□□ -0.36
PAX6-271ENST00000640431 WDR61Q9GZS3 305 aaKnown RBP12.8□□□□□ -0.36
PAX6-271ENST00000640431 CISD1Q9NZ45 108 aaKnown RBP12.8□□□□□ -0.36
PAX6-271ENST00000640431 TMEM210A6NLX4 147 aa12.79□□□□□ -0.36
PAX6-271ENST00000640431 WNT9BO14905 357 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms