RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ZNF91Q05481 1191 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 DYNC1I2Q13409 638 aaKnown RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 CDK5R1Q15078 307 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 MPPED2Q15777 294 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 ZNF74Q16587 644 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 C12orf74Q32Q52 190 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 FAM106AQ4KMX7 169 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 C5orf47Q569G3 176 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 SPANXN4Q5MJ08 99 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 TMPRSS11AQ6ZMR5 421 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 LRRC34Q8IZ02 419 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 OR5T1Q8NG75 326 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 FANK1Q8TC84 345 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 TCP10LQ8TDR4 215 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 DYNLRB2Q8TF09 96 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 SLC35B4Q969S0 331 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 SLC25A44Q96H78 314 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 C7orf50Q9BRJ6 194 aaKnown RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 NAT9Q9BTE0 207 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 WFDC10AQ9H1F0 79 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 ABCB9Q9NP78 766 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 C11orf21Q9P2W6 132 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 DCDC2Q9UHG0 476 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 NAGKQ9UJ70 344 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 LINC00527Q9UJ94 153 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 GUCA1BQ9UMX6 200 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 ERGIC3Q9Y282 383 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-213ENST00000639290 BLOC1S5-TXNDC5H3BN57 136 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-213ENST00000639290 RGS16O15492 202 aaPredicted RBP2.38□□□□□ -2.03
CCDC7-213ENST00000639290 XRCC2O43543 280 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 DUX4L4P0CJ87 422 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 ZNF728P0DKX0 622 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 MLNP12872 115 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 AQP5P55064 265 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 DSTNP60981 165 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 SCRN3Q0VDG4 424 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 EIF2B1Q14232 305 aaKnown RBP2.38□□□□□ -2.03
CCDC7-213ENST00000639290 RFX4Q33E94 735 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 SAMD4BQ5PRF9 694 aaKnown RBP2.38□□□□□ -2.03
CCDC7-213ENST00000639290 Q8N6K4 173 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 SFXN5Q8TD22 340 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 LRRC29Q8WV35 223 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 URB1-AS1Q96HZ7 61 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 RNF170Q96K19 258 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 ATP5SQ99766 215 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 C9orf16Q9BUW7 83 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 PAPOLGQ9BWT3 736 aaKnown RBP2.38□□□□□ -2.03
CCDC7-213ENST00000639290 KRTAP3-1Q9BYR8 98 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 TMEM133Q9H2Q1 129 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 OR51M1Q9H341 326 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 DPH3P1Q9H4G8 78 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 C19orf12Q9NSK7 152 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 CDH10Q9Y6N8 788 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 URGCP-MRPS24S4R325 110 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 A0A0J9YXV3 536 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 hCG_38984A0A1B0GV85 526 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 TMEM213A2RRL7 107 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 MGST3O14880 152 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 ATP6V0E1O15342 81 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 TSPAN13O95857 204 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 GNRHRP30968 328 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 BRWD1-AS2P59051 145 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 VBP1P61758 197 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 SNCBQ16143 134 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 OR2T2Q6IF00 324 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 Q6ZSR3 168 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 OR5AS1Q8N127 324 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 C16orf78Q8WTQ4 265 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 CDS1Q92903 461 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 ISOC2Q96AB3 205 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 KCNA7Q96RP8 456 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 ZNF251Q9BRH9 671 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 CHST5Q9GZS9 411 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 SRRQ9GZT4 340 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 Q9HAA7 133 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 VCX3AQ9NNX9 186 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 RASL12Q9NYN1 266 aa2.38□□□□□ -2.03
CCDC7-213ENST00000639290 FAM172BPA6NC97 362 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 FABP12A6NFH5 140 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 E7ESA3 106 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 K7EP13 123 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 SLC1A7O00341 560 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 UGT2B17O75795 530 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 HTR2CP28335 458 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 VHLP40337 213 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 ALDH3B2P48448 385 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 HMGA2P52926 109 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 ACTA2P62736 377 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 ACTG2P63267 376 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 ACTC1P68032 377 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 ACTA1P68133 377 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 RPL24P83731 157 aaKnown RBP2.37□□□□□ -2.03
CCDC7-213ENST00000639290 TMEM187Q14656 261 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 PTGES3Q15185 160 aaKnown RBP2.37□□□□□ -2.03
CCDC7-213ENST00000639290 GUCA2BQ16661 112 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 UTF1Q5T230 341 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 CCNJQ5T5M9 372 aa2.37□□□□□ -2.03
CCDC7-213ENST00000639290 ZNF546Q86UE3 836 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms