RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TAS2R20P59543 309 aa17.25■□□□□ 0.35
SCN1B-206ENST00000638536 GINS4Q9BRT9 223 aa17.25■□□□□ 0.35
SCN1B-206ENST00000638536 OR2D2Q9H210 308 aa17.25■□□□□ 0.35
SCN1B-206ENST00000638536 ANXA10Q9UJ72 324 aa17.25■□□□□ 0.35
SCN1B-206ENST00000638536 LINC00527Q9UJ94 153 aa17.25■□□□□ 0.35
SCN1B-206ENST00000638536 H0YJW9 148 aa17.24■□□□□ 0.35
SCN1B-206ENST00000638536 ELK1P19419 428 aa17.24■□□□□ 0.35
SCN1B-206ENST00000638536 NFYAP23511 347 aaPredicted RBP17.24■□□□□ 0.35
SCN1B-206ENST00000638536 RPL5P46777 297 aaKnown RBP17.24■□□□□ 0.35
SCN1B-206ENST00000638536 ACTBP60709 375 aa17.24■□□□□ 0.35
SCN1B-206ENST00000638536 FAM71E2Q8N5Q1 922 aa17.24■□□□□ 0.35
SCN1B-206ENST00000638536 ZNF383Q8NA42 475 aa17.24■□□□□ 0.35
SCN1B-206ENST00000638536 NOL4LQ96MY1 436 aaPredicted RBP17.24■□□□□ 0.35
SCN1B-206ENST00000638536 SDHAF2Q9NX18 166 aa17.24■□□□□ 0.35
SCN1B-206ENST00000638536 ZNF221Q9UK13 617 aa17.24■□□□□ 0.35
SCN1B-206ENST00000638536 TMEM69Q5SWH9 247 aa17.23■□□□□ 0.35
SCN1B-206ENST00000638536 HOGA1Q86XE5 327 aa17.23■□□□□ 0.35
SCN1B-206ENST00000638536 BEST4Q8NFU0 473 aa17.23■□□□□ 0.35
SCN1B-206ENST00000638536 OR5AN1Q8NGI8 311 aa17.23■□□□□ 0.35
SCN1B-206ENST00000638536 SNAPC3Q92966 411 aa17.23■□□□□ 0.35
SCN1B-206ENST00000638536 GHITMQ9H3K2 345 aa17.23■□□□□ 0.35
SCN1B-206ENST00000638536 PEX14O75381 377 aa17.22■□□□□ 0.35
SCN1B-206ENST00000638536 HLA-DQB1P01920 261 aa17.22■□□□□ 0.35
SCN1B-206ENST00000638536 PRR31Q5SQ13 230 aa17.22■□□□□ 0.35
SCN1B-206ENST00000638536 CNIH2Q6PI25 160 aa17.22■□□□□ 0.35
SCN1B-206ENST00000638536 HSPB9Q9BQS6 159 aa17.22■□□□□ 0.35
SCN1B-206ENST00000638536 M0R1X1 148 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 IGHG2P01859 326 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 ZNF182P17025 639 aaPredicted RBP17.21■□□□□ 0.35
SCN1B-206ENST00000638536 MMDQ15546 238 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 TCTEX1D4Q5JR98 221 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 ACOT12Q8WYK0 555 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 IGKV1D-13A0A0B4J2D9 117 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 APOA1P02647 267 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 IGKV1-13P0DP09 117 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 OR5AU1Q8NGC0 362 aa17.21■□□□□ 0.35
SCN1B-206ENST00000638536 LIN7CQ9NUP9 197 aaKnown RBP17.21■□□□□ 0.35
SCN1B-206ENST00000638536 MRPS7Q9Y2R9 242 aaKnown RBP17.21■□□□□ 0.35
SCN1B-206ENST00000638536 TSPAN15O95858 294 aa17.2■□□□□ 0.34
SCN1B-206ENST00000638536 IGKV1-16P04430 117 aa17.2■□□□□ 0.34
SCN1B-206ENST00000638536 CENPVQ7Z7K6 275 aaPredicted RBP17.2■□□□□ 0.34
SCN1B-206ENST00000638536 CITED2Q99967 270 aaPredicted RBP17.2■□□□□ 0.34
SCN1B-206ENST00000638536 GAB2Q9UQC2 676 aa17.2■□□□□ 0.34
SCN1B-206ENST00000638536 RBM7Q9Y580 266 aaKnown RBP17.2■□□□□ 0.34
SCN1B-206ENST00000638536 TNCP24821 2201 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 OR5H14A6NHG9 310 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 FBXO24O75426 580 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 CTXN2P0C2S0 81 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 TMBIM6P55061 237 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 ZNF329Q86UD4 541 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.19■□□□□ 0.34
SCN1B-206ENST00000638536 OR8H1Q8NGG4 311 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 RAB2BQ8WUD1 216 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 CMTM3Q96MX0 182 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 RASL11BQ9BPW5 248 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 OR2W1Q9Y3N9 320 aa17.19■□□□□ 0.34
SCN1B-206ENST00000638536 ADARB2-AS1A8MUL3 147 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 H7C2Y5 167 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 IGLV2-14P01704 120 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 SLC35E3Q7Z769 313 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 NPBQ8NG41 125 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 ZNF107Q9UII5 783 aaPredicted RBP17.18■□□□□ 0.34
SCN1B-206ENST00000638536 WASHC3Q9Y3C0 194 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 NOTCH3Q9UM47 2321 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 NOTCH1P46531 2555 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 NBR2O15453 112 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 TUSC2O75896 110 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 ARPC4P59998 168 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 SNX29P2Q8IUI4 249 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 DYNC2LI1Q8TCX1 351 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 MIXL1Q9H2W2 232 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 ANAPC10Q9UM13 185 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 CEPT1Q9Y6K0 416 aa17.18■□□□□ 0.34
SCN1B-206ENST00000638536 LINC00473A8K010 186 aa17.17■□□□□ 0.34
SCN1B-206ENST00000638536 H3BMQ9 156 aa17.17■□□□□ 0.34
SCN1B-206ENST00000638536 CTDSP2O14595 271 aa17.17■□□□□ 0.34
SCN1B-206ENST00000638536 NDUFA3O95167 84 aa17.17■□□□□ 0.34
SCN1B-206ENST00000638536 MC5RP33032 325 aa17.17■□□□□ 0.34
SCN1B-206ENST00000638536 ISOC1Q96CN7 298 aa17.17■□□□□ 0.34
SCN1B-206ENST00000638536 FBXL15Q9H469 300 aa17.17■□□□□ 0.34
SCN1B-206ENST00000638536 SCOCQ9UIL1 159 aa17.17■□□□□ 0.34
SCN1B-206ENST00000638536 M0QZ24 198 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 PRSS3P35030 304 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 SOX6P35712 828 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 LUMP51884 338 aaPredicted RBP17.16■□□□□ 0.34
SCN1B-206ENST00000638536 CD83Q01151 205 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 C5orf64Q2M2E5 130 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 NSUN5P1Q3KNT7 163 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 MZT2AQ6P582 158 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 TREML4Q6UXN2 200 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 AP3S1Q92572 193 aa17.16■□□□□ 0.34
SCN1B-206ENST00000638536 FAM25AB3EWG3 89 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 FAM25CB3EWG5 89 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 FAM25GB3EWG6 89 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 AADACP22760 399 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 FCGR2CP31995 323 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 DUTP33316 252 aaKnown RBP17.15■□□□□ 0.34
SCN1B-206ENST00000638536 CBX5P45973 191 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 LYSMD2Q8IV50 215 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 STPG2Q8N412 459 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms