RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 Q8NA96 180 aa17.91■□□□□ 0.46
CLN6-224ENST00000638076 PLPPR2Q96GM1 343 aa17.91■□□□□ 0.46
CLN6-224ENST00000638076 PBDC1Q9BVG4 233 aa17.91■□□□□ 0.46
CLN6-224ENST00000638076 FBXO7Q9Y3I1 522 aa17.91■□□□□ 0.46
CLN6-224ENST00000638076 TNFRSF9Q07011 255 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 SPANXN5Q5MJ07 72 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 AKR1C8PQ5T2L2 129 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 ZNF66Q6ZN08 573 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 SPACA3Q8IXA5 215 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 GATA4P43694 442 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 EDDM3BP56851 147 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 ANKRD11Q6UB99 2663 aaPredicted RBP17.9■□□□□ 0.46
CLN6-224ENST00000638076 MRGPRGQ86SM5 289 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 HAPLN4Q86UW8 402 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 RBKSQ9H477 322 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 GNG12Q9UBI6 72 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 SSUH2Q9Y2M2 353 aa17.9■□□□□ 0.46
CLN6-224ENST00000638076 H2AFB1P0C5Y9 115 aa17.89■□□□□ 0.46
CLN6-224ENST00000638076 CCL20P78556 96 aa17.89■□□□□ 0.46
CLN6-224ENST00000638076 SPSB3Q6PJ21 355 aa17.89■□□□□ 0.46
CLN6-224ENST00000638076 TCTEX1D1Q8N7M0 179 aa17.89■□□□□ 0.46
CLN6-224ENST00000638076 EDARADDQ8WWZ3 215 aa17.89■□□□□ 0.46
CLN6-224ENST00000638076 HSD17B10Q99714 261 aaKnown RBP17.89■□□□□ 0.46
CLN6-224ENST00000638076 SH3BGRL2Q9UJC5 107 aa17.89■□□□□ 0.46
CLN6-224ENST00000638076 PTPRZ1P23471 2315 aaPredicted RBP17.89■□□□□ 0.45
CLN6-224ENST00000638076 TNFAIP6P98066 277 aaPredicted RBP17.89■□□□□ 0.45
CLN6-224ENST00000638076 CR1LQ2VPA4 569 aa17.89■□□□□ 0.45
CLN6-224ENST00000638076 GCM1Q9NP62 436 aa17.89■□□□□ 0.45
CLN6-224ENST00000638076 HSPB7Q9UBY9 170 aa17.89■□□□□ 0.45
CLN6-224ENST00000638076 JPT1Q9UK76 154 aa17.89■□□□□ 0.45
CLN6-224ENST00000638076 RP1L1Q8IWN7 2480 aaPredicted RBP17.89■□□□□ 0.45
CLN6-224ENST00000638076 DIDO1Q9BTC0 2240 aaKnown RBP17.88■□□□□ 0.45
CLN6-224ENST00000638076 LRRC30A6NM36 301 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 IGHV1-46P01743 117 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 HBG1P69891 147 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 HBG2P69892 147 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 MORN2Q502X0 79 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 ZNF525Q8N782 197 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 IL19Q9UHD0 177 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 USF3Q68DE3 2245 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 CLDN14O95500 239 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 SELLP14151 372 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 GFRALQ6UXV0 394 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 LILRB2Q8N423 598 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 SCGB1C1Q8TD33 95 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 RARRES2Q99969 163 aa17.88■□□□□ 0.45
CLN6-224ENST00000638076 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.88■□□□□ 0.45
CLN6-224ENST00000638076 GPR12P47775 334 aa17.87■□□□□ 0.45
CLN6-224ENST00000638076 RSG1Q9BU20 258 aa17.87■□□□□ 0.45
CLN6-224ENST00000638076 SCNM1Q9BWG6 230 aa17.87■□□□□ 0.45
CLN6-224ENST00000638076 RNF7Q9UBF6 113 aa17.87■□□□□ 0.45
CLN6-224ENST00000638076 A0A1B0GW64 132 aa17.87■□□□□ 0.45
CLN6-224ENST00000638076 C16orf97H3BN30 126 aa17.87■□□□□ 0.45
CLN6-224ENST00000638076 H2BFWTQ7Z2G1 175 aa17.87■□□□□ 0.45
CLN6-224ENST00000638076 SPTBN2O15020 2390 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 YPEL1O60688 119 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 PROP1O75360 226 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 TBR1Q16650 682 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 AKIRIN2Q53H80 203 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 TMEM108Q6UXF1 575 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 NUP37Q8NFH4 326 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 FAM222BQ8WU58 562 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 YPEL2Q96QA6 119 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 SLC35B3Q9H1N7 401 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 LAMP3Q9UQV4 416 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 BTBD17A6NE02 478 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 RAB29O14966 203 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 CYB5R3P00387 301 aaPredicted RBP17.86■□□□□ 0.45
CLN6-224ENST00000638076 IGHV3-7P01780 117 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 LOXL3P58215 753 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 TLE4Q04727 773 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 NCR3LG1Q68D85 454 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 WFDC8Q8IUA0 241 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 SFT2D1Q8WV19 159 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 C14orf79Q96F83 325 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 ELOVL5Q9NYP7 299 aa17.86■□□□□ 0.45
CLN6-224ENST00000638076 APC2O95996 2303 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 F2RL2O00254 374 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 DUTP33316 252 aaKnown RBP17.85■□□□□ 0.45
CLN6-224ENST00000638076 TMEM14EPQ6UXP3 125 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 DPPA3Q6W0C5 159 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 ETV3LQ6ZN32 361 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 ZNF561Q8N587 486 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 CALYQ9NYX4 217 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 OR6C3Q9NZP0 311 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 CLN8Q9UBY8 286 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 ACACAQ13085 2346 aa17.85■□□□□ 0.45
CLN6-224ENST00000638076 RBFOX3A6NFN3 312 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 MARCH11A6NNE9 402 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 CTRB1P17538 263 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 LRRC75BQ2VPJ9 315 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 HFEQ30201 348 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 SP5Q6BEB4 398 aaPredicted RBP17.84■□□□□ 0.45
CLN6-224ENST00000638076 CTRB2Q6GPI1 263 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 OR8G2PQ6IF36 304 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 DUX4L9Q6RFH8 374 aaPredicted RBP17.84■□□□□ 0.45
CLN6-224ENST00000638076 NDRG3Q9UGV2 375 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 RBMXL2O75526 392 aaKnown RBP17.84■□□□□ 0.45
CLN6-224ENST00000638076 OR13C7P0DN81 318 aa17.84■□□□□ 0.45
CLN6-224ENST00000638076 TNFSF4P23510 183 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms