RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 OR2H1Q9GZK4 316 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 SH2D5Q6ZV89 423 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 OVCH2Q7RTZ1 564 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 TMEM70Q9BUB7 260 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 PITX3O75364 302 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 SSTR5P35346 364 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 TNFSF10P50591 281 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 ZNF324BQ6AW86 544 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 NPFFR1Q9GZQ6 430 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 CLDN14O95500 239 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 GAPDHP04406 335 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 FCGR3AP08637 254 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 TSPOP30536 169 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 NEU3Q9UQ49 428 aa16.6■□□□□ 0.25
CACNA1A-246ENST00000637736 H3BQ15 152 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 STRCP1A6NGW2 1772 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 IFNL4K9M1U5 179 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 MBNL2Q5VZF2 373 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 WDR54Q9H977 334 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 SOCS1O15524 211 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 TMPRSS3P57727 454 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 HMGCLL1Q8TB92 370 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 MYEOVQ96EZ4 313 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 LINC00470Q9BZP3 86 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 C9orf50Q5SZB4 431 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 C12orf54Q6X4T0 127 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 WDR34Q96EX3 536 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 IL36RNQ9UBH0 155 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 CTXND1A0A1B0GTU2 59 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 IL4P05112 153 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 FBXW9Q5XUX1 488 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 LINC01555Q8NAE3 123 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 SPOCK3Q9BQ16 436 aa16.59■□□□□ 0.25
CACNA1A-246ENST00000637736 ADAMTSL1Q8N6G6 1762 aa16.58■□□□□ 0.25
CACNA1A-246ENST00000637736 LRRK1Q38SD2 2015 aa16.58■□□□□ 0.25
CACNA1A-246ENST00000637736 PNLIPP16233 465 aa16.58■□□□□ 0.25
CACNA1A-246ENST00000637736 IGHV3-72A0A0B4J1Y9 119 aa16.58■□□□□ 0.25
CACNA1A-246ENST00000637736 SLC25A20O43772 301 aa16.58■□□□□ 0.25
CACNA1A-246ENST00000637736 TMEM50BP56557 158 aa16.58■□□□□ 0.25
CACNA1A-246ENST00000637736 PLA2G2FQ9BZM2 168 aa16.58■□□□□ 0.25
CACNA1A-246ENST00000637736 SDK2Q58EX2 2172 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 MALP21145 153 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 TEX30Q5JUR7 227 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 IBA57Q5T440 356 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 HCP5Q6MZN7 132 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 THY1P04216 161 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 NPBWR2P48146 333 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 SMAD7O15105 426 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 TMEM95Q3KNT9 176 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 ALG14Q96F25 216 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 CDS2O95674 445 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 MC5RP33032 325 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 ZNF506Q5JVG8 444 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 PTPRFP10586 1907 aa16.58■□□□□ 0.24
CACNA1A-246ENST00000637736 FAM3BP58499 235 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 ATP5G2Q06055 141 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 SERGEFQ9UGK8 458 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 CCL19Q99731 98 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 HSPB9Q9BQS6 159 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 IGHV5-10-1A0A0J9YXX1 117 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 UNQ5815/PRO19632Q6UWF5 114 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 FAM169BQ8N8A8 192 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 NPVFQ9HCQ7 196 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 TBL2Q9Y4P3 447 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 NKX2-6A6NCS4 301 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 J3QT63 122 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 RCC2Q9P258 522 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 CCL8P80075 99 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 CHST5Q9GZS9 411 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 FRRS1LQ9P0K9 344 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 HTN3P15516 51 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 EWSR1Q01844 656 aaKnown RBP eCLIP16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 PGLYRP3Q96LB9 341 aa16.57■□□□□ 0.24
CACNA1A-246ENST00000637736 STARD6P59095 220 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 COX14Q96I36 57 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 CDK2AP2O75956 126 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 OTX1P32242 354 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 FAM159AQ6UWV7 190 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 MTURNQ8N3F0 131 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 SMDT1Q9H4I9 107 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 C1orf185Q5T7R7 199 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 NUTF2P61970 127 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 PSG9Q00887 426 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 RGP1Q92546 391 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 C17orf51A8MQB3 221 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 SLC25A17O43808 307 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 RPL27AP46776 148 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 PHLDA1Q8WV24 401 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 MRPL16Q9NX20 251 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 MRM2Q9UI43 246 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 PXMP4Q9Y6I8 212 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 EDIL3O43854 480 aa16.56■□□□□ 0.24
CACNA1A-246ENST00000637736 ADAD2Q8NCV1 583 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-246ENST00000637736 HPRT1P00492 218 aa16.55■□□□□ 0.24
CACNA1A-246ENST00000637736 TDGF1P13385 188 aa16.55■□□□□ 0.24
CACNA1A-246ENST00000637736 MIOXQ9UGB7 285 aa16.55■□□□□ 0.24
CACNA1A-246ENST00000637736 ZNF407Q9C0G0 2248 aa16.55■□□□□ 0.24
CACNA1A-246ENST00000637736 BRCA1P38398 1863 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-246ENST00000637736 TRBV7-9A0A0J9YWB2 115 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms