RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SESN1Q9Y6P5 492 aa12.6□□□□□ -0.39
CLN6-219ENST00000637329 M0R1W7 72 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 CCSO14618 274 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 RAB29O14966 203 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 MMP23AO75900 390 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 SERPINE2P07093 398 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 GZMKP49863 264 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 SP6Q3SY56 376 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 CT45A1Q5HYN5 189 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 FAM53AQ6NSI3 398 aaPredicted RBP12.59□□□□□ -0.39
CLN6-219ENST00000637329 FAM71F2Q6NXP2 309 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 OR51H1Q8NH63 302 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 CT45A3Q8NHU0 189 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 C10orf105Q8TEF2 133 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 C5orf30Q96GV9 206 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 PRR13Q9NZ81 148 aa12.59□□□□□ -0.39
CLN6-219ENST00000637329 NAV3Q8IVL0 2385 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 AKAP9Q99996 3911 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 LOC105371242A0A075B767 164 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 C5orf51A6NDU8 294 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 C22orf46C9J442 243 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 ENSAO43768 121 aaKnown RBP12.58□□□□□ -0.4
CLN6-219ENST00000637329 ADAP1O75689 374 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 SNAPC5O75971 98 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 SIX6O95475 246 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 DNASE1P24855 282 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 KIR2DS2P43631 304 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 SPNS3Q6ZMD2 512 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 ZNF695Q8IW36 515 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 CLDND2Q8NHS1 167 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 CD300LFQ8TDQ1 290 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 ABHD14BQ96IU4 210 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 ADTRPQ96IZ2 230 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 SPIN2AQ99865 258 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 SPIN2BQ9BPZ2 258 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 TMEM133Q9H2Q1 129 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 RNF150Q9ULK6 438 aa12.58□□□□□ -0.4
CLN6-219ENST00000637329 SAA2-SAA4A0A096LPE2 208 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 KIAA1324LA8MWY0 1029 aaPredicted RBP12.57□□□□□ -0.4
CLN6-219ENST00000637329 FAM25EA8MYX2 175 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 VWC2LB2RUY7 222 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 G3V3Q6 166 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 SLC31A2O15432 143 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 RBFOX2O43251 390 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLN6-219ENST00000637329 ATG12O94817 140 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 HOXB5P09067 269 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 SAA2P0DJI9 122 aaPredicted RBP12.57□□□□□ -0.4
CLN6-219ENST00000637329 DUTP33316 252 aaKnown RBP12.57□□□□□ -0.4
CLN6-219ENST00000637329 GNG10P50151 68 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 ZNF134P52741 427 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 ZNF137PP52743 207 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 ERVFRD-1P60508 538 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 KIAA2026Q5HYC2 2103 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 GGNBP1Q5YKI7 109 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 C11orf42Q8N5U0 333 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 OR9G1Q8NH87 305 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 LHFPL5Q8TAF8 219 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 TCTEX1D2Q8WW35 142 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 C2orf50Q96LR7 162 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 S1PR3Q99500 378 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 NARFLQ9H6Q4 476 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
CLN6-219ENST00000637329 COMMD9Q9P000 198 aa12.57□□□□□ -0.4
CLN6-219ENST00000637329 NIPBLQ6KC79 2804 aaeCLIP12.57□□□□□ -0.4
CLN6-219ENST00000637329 PET100P0DJ07 73 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 VDAC1P21796 283 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 IL3RAP26951 378 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 THBS3P49746 956 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 LMO4P61968 165 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 C1orf122Q6ZSJ8 110 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 ODF3L1Q8IXM7 274 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 SELENOHQ8IZQ5 122 aaKnown RBP12.56□□□□□ -0.4
CLN6-219ENST00000637329 LEAP2Q969E1 77 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 POLR3KQ9Y2Y1 108 aaPredicted RBP12.56□□□□□ -0.4
CLN6-219ENST00000637329 PRELID3BQ9Y3B1 194 aa12.56□□□□□ -0.4
CLN6-219ENST00000637329 CSMD2Q7Z408 3487 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 ABCA2Q9BZC7 2435 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 C13orf42A0A1B0GVH6 325 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 SMLR1H3BR10 107 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 J3QR06 171 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 M0R1X1 148 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 FOXH1O75593 365 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 SLC25A6P12236 298 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 IAH1Q2TAA2 248 aaPredicted RBP12.55□□□□□ -0.4
CLN6-219ENST00000637329 NMSQ5H8A3 153 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 BTNL3Q6UXE8 466 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 ZNF833PQ6ZTB9 187 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 LYZL2Q7Z4W2 148 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 FAM219AQ8IW50 185 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 LYG1Q8N1E2 194 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 LRRC75A-AS1Q8N1F1 130 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 BEND2Q8NDZ0 799 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 PPP1R1CQ8WVI7 109 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 LSM10Q969L4 123 aaKnown RBP12.55□□□□□ -0.4
CLN6-219ENST00000637329 PERPQ96FX8 193 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 GPHA2Q96T91 129 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 ZFP57Q9NU63 452 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 ONECUT1Q9UBC0 465 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms