RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ZP4Q12836 540 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 TMEM170BQ5T4T1 132 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 TCF21O43680 179 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 PDE6DO43924 150 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 EEF1AKMT3Q96AZ1 226 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 DUSP15Q9H1R2 295 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 FXYD7P58549 80 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 PSG4Q00888 419 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 ZPLD1Q8TCW7 415 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 RBFOX2O43251 390 aaKnown RBP eCLIP15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 CD99P14209 185 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 FDCSPQ8NFU4 85 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 LINC00527Q9UJ94 153 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 TMEM52Q8NDY8 209 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 DNASE2BQ8WZ79 361 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 GP6Q9HCN6 339 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 ZFP30Q9Y2G7 519 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 OTOFQ9HC10 1997 aa15.41■□□□□ 0.06
CACNA1A-227ENST00000636549 VDAC2P45880 294 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 PQLC2Q6ZP29 291 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 OR8D4Q8NGM9 314 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 KIAA0100Q14667 2235 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 AWAT1Q58HT5 328 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 Q9N2K0 584 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 TCRBV4S1A1TA0A5B7 111 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 SNAI3Q3KNW1 292 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 SNAI2O43623 268 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 LMX1BO60663 402 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 CDX1P47902 265 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 SPSB4Q96A44 273 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 RPL36A-HNRNPH2H7BZ11 118 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 NDUFB6O95139 128 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 IGKV1D-33P01593 117 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 IGKV1-33P01594 117 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 RBKSQ9H477 322 aa15.4■□□□□ 0.06
CACNA1A-227ENST00000636549 TMEM210A6NLX4 147 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 RPL35AP18077 110 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 FAM3BP58499 235 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 MIC13Q5XKP0 118 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 SLC22A18ASQ8N1D0 253 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 TNFRSF18Q9Y5U5 241 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 A0A0J9YW62 118 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 DNAL4O96015 105 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 CIRBPQ14011 172 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 C10orf111Q8N326 155 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 FAM89BQ8N5H3 189 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 ST6GALNAC3Q8NDV1 305 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 OPN4Q9UHM6 478 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 CD1AP06126 327 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 ASCL4Q6XD76 172 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 IGHV3-73A0A0B4J1V6 119 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 OR4C45A6NMZ5 311 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 J3QT63 122 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 FAM209BQ5JX69 171 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 FAM214BQ7L5A3 538 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 ST6GAL2Q96JF0 529 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 TMEM74BQ9NUR3 256 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 LAMA4Q16363 1823 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 K7ERU9 68 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 SCARF2Q96GP6 870 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 SSBP3Q9BWW4 388 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 IDI2-AS1Q9NZ38 188 aa15.39■□□□□ 0.05
CACNA1A-227ENST00000636549 IGHV3-64A0A075B6Q5 118 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 EPOPA6NHQ4 379 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 NPPCP23582 126 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 OR4D11Q8NGI4 311 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 SCMH1Q96GD3 660 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 CFAP161Q6P656 301 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 ASPDHA6ND91 283 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 KIAA1644Q3SXP7 199 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 CXorf51AA0A1B0GTR3 108 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 NDUFB4O95168 129 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 SFTA2Q6UW10 78 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 DOCK2Q92608 1830 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 COX6CP09669 75 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 KIR3DL3Q8N743 410 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 ZNF383Q8NA42 475 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 OR4X2Q8NGF9 303 aa15.38■□□□□ 0.05
CACNA1A-227ENST00000636549 IL24Q13007 206 aa15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 COLCA1Q6ZS62 124 aa15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 ZNF721Q8TF20 911 aa15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 CYB5R1Q9UHQ9 305 aa15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 MIOXQ9UGB7 285 aa15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 CLEC7AQ9BXN2 247 aa15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 LYNX1G3V0Z9 82 aa15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 LYNX1P0DP58 116 aa15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 PEBP1P30086 187 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-227ENST00000636549 CD33P20138 364 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 RBM11P57052 281 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 C12orf73Q69YU5 71 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 CBLN2Q8IUK8 224 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 ZNRF1Q8ND25 227 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 KLHDC2Q9Y2U9 406 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 TRAV21A0A0B4J279 112 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 CENPVL1A0A0U1RR11 272 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 ARRDC5A6NEK1 342 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 LSM10Q969L4 123 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 MAST2Q6P0Q8 1798 aa15.36■□□□□ 0.05
CACNA1A-227ENST00000636549 CRYBB2P43320 205 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms