RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PPIFP30405 207 aaKnown RBP13.98□□□□□ -0.17
PNKP-225ENST00000636214 CHRNA7P36544 502 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 FABP5Q01469 135 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 ZNF616Q08AN1 781 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 TBCEQ15813 527 aaPredicted RBP13.98□□□□□ -0.17
PNKP-225ENST00000636214 C2orf76Q3KRA6 126 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 ZNF260Q3ZCT1 412 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 TCTEX1D1Q8N7M0 179 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 OR5B12Q96R08 314 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 RNF5Q99942 180 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 B9D2Q9BPU9 175 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 PARP12Q9H0J9 701 aaKnown RBP13.98□□□□□ -0.17
PNKP-225ENST00000636214 C11orf54Q9H0W9 315 aaPredicted RBP13.98□□□□□ -0.17
PNKP-225ENST00000636214 RAB22AQ9UL26 194 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 SORL1Q92673 2214 aa13.98□□□□□ -0.17
PNKP-225ENST00000636214 TRDCB7Z8K6 153 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 IGLV1-40P01703 118 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 SCTP09683 121 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 ECI1P42126 302 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 SERPINB10P48595 397 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 RAB9AP51151 201 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 FHL3Q13643 280 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 HES5Q5TA89 166 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 PYHIN1Q6K0P9 492 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 MYOZ3Q8TDC0 251 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 TSNAXQ99598 290 aaKnown RBP13.97□□□□□ -0.17
PNKP-225ENST00000636214 KLK15Q9H2R5 256 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 GNB4Q9HAV0 340 aa13.97□□□□□ -0.17
PNKP-225ENST00000636214 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.97□□□□□ -0.17
PNKP-225ENST00000636214 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
PNKP-225ENST00000636214 FOXA2Q9Y261 457 aaPredicted RBP13.97□□□□□ -0.17
PNKP-225ENST00000636214 TMEM272A0A1B0GTI8 110 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 TFAP2AP05549 437 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 RPS16P62249 146 aaKnown RBP13.96□□□□□ -0.17
PNKP-225ENST00000636214 RUNX1Q01196 453 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 CBX3Q13185 183 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 MINDY2Q8NBR6 621 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 OR5AN1Q8NGI8 311 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 OR4A4PQ8NGN8 299 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 RAB3CQ96E17 227 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 CLCC1Q96S66 551 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 AGMATQ9BSE5 352 aa13.96□□□□□ -0.17
PNKP-225ENST00000636214 I3L521 148 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 LY86O95711 162 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 INSL3P51460 131 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 TMEM50BP56557 158 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 CX3CL1P78423 397 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 NDPQ00604 133 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 UNQ5815/PRO19632Q6UWF5 114 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 PPP1R27Q86WC6 154 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 PDPNQ86YL7 162 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 DRAXINQ8NBI3 349 aaPredicted RBP13.95□□□□□ -0.18
PNKP-225ENST00000636214 PTX4Q96A99 478 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 PRR25Q96S07 402 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 RDH8Q9NYR8 311 aa13.95□□□□□ -0.18
PNKP-225ENST00000636214 RBM7Q9Y580 266 aaKnown RBP13.95□□□□□ -0.18
PNKP-225ENST00000636214 A0A075B6Q4 140 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 METTL21EPA6NDL7 271 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 FOXI3A8MTJ6 420 aaPredicted RBP13.94□□□□□ -0.18
PNKP-225ENST00000636214 BET1O15155 118 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 FABP7O15540 132 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 SPDEFO95238 335 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 CRIP2P52943 208 aaPredicted RBP13.94□□□□□ -0.18
PNKP-225ENST00000636214 GNB1P62873 340 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 ACTBL2Q562R1 376 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 PLAC9Q5JTB6 97 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 C11orf87Q6NUJ2 197 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.94□□□□□ -0.18
PNKP-225ENST00000636214 OR10J5Q8NHC4 309 aa13.94□□□□□ -0.18
PNKP-225ENST00000636214 FLYWCH2Q96CP2 140 aaKnown RBP13.94□□□□□ -0.18
PNKP-225ENST00000636214 COL7A1Q02388 2944 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 TRAV1-2A0A0B4J238 106 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 LINC01619G3V211 115 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 M0R1X1 148 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 OVOL1O14753 267 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 RAB3BP20337 219 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 TALDO1P37837 337 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 PSG5Q15238 335 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 ZNF429Q86V71 674 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 OR10R2Q8NGX6 335 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 GINS4Q9BRT9 223 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 CENPOQ9BU64 300 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 OR2D2Q9H210 308 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 SLC35D1Q9NTN3 355 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 NDUFB11Q9NX14 153 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 RAB26Q9ULW5 256 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 ZNF256Q9Y2P7 627 aaPredicted RBP13.93□□□□□ -0.18
PNKP-225ENST00000636214 FBXO7Q9Y3I1 522 aa13.93□□□□□ -0.18
PNKP-225ENST00000636214 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 LDLRAD4O15165 306 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 CA2P00918 260 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 FCGR3AP08637 254 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 LGALS1P09382 135 aaKnown RBP13.92□□□□□ -0.18
PNKP-225ENST00000636214 ARFRP1Q13795 201 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 SSX1Q16384 188 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 CD200R1LQ6Q8B3 271 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 ZNF562Q6V9R5 426 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 ARPC1AQ92747 370 aa13.92□□□□□ -0.18
PNKP-225ENST00000636214 FAM103A1Q9BTL3 118 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms