RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 CMTM3Q96MX0 182 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 PSKH2Q96QS6 385 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 OR2A7Q96R45 310 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 CRACR2AQ9BSW2 395 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 TMEM147Q9BVK8 224 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 GGACTQ9BVM4 153 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 TCEAL2Q9H3H9 227 aaPredicted RBP-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 FBXO44Q9H4M3 255 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 LYARQ9NX58 379 aaKnown RBP-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 BFARQ9NZS9 450 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 NAT8Q9UHE5 227 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 LAMP5Q9UJQ1 280 aa-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 NOSIPQ9Y314 301 aaKnown RBP-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 NUP153P49790 1475 aaKnown RBP-1.72□□□□□ -2.68
CDKL5-210ENST00000636046 SZT2Q5T011 3432 aa-1.72□□□□□ -2.69
CDKL5-210ENST00000636046 USP34Q70CQ2 3546 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 SIP14410 1827 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 ZNF142P52746 1687 aaPredicted RBP-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 PTPRFP10586 1907 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 CDC42BPAQ5VT25 1732 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 TRBV20OR9-2A0A075B6H5 130 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 A0A087X0K7 114 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 NBDYA0A0U1RRE5 68 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 ZNF816-ZNF321PA0A0X1KG74 233 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 LRRIQ4A6NIV6 560 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 C9JAW5 83 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 CLDN5O00501 218 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 NPFFO15130 113 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 PSPHP1O15172 72 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 COX7A2P2O60397 106 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 GMNNO75496 209 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 CNIH1O95406 144 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 GAS8O95995 478 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 OR5AL1P0C617 328 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 BAALC-AS2P0C853 105 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 GSTT2P0CG29 244 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 GSTT2BP0CG30 244 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 RALAP11233 206 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 PDE6GP18545 87 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 SRMP19623 302 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 RPS4Y1P22090 263 aaKnown RBP-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 NPPCP23582 126 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 VAMP1P23763 118 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 FXYD2P54710 66 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 ARL4CP56559 192 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 MAP3K7CLP57077 242 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 GEMIN4P57678 1058 aaKnown RBP-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 OR2B8PP59922 312 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 UBE2D3P61077 147 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 UBE2D2P62837 147 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 SLC35A1P78382 337 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 RPA4Q13156 261 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 OR4D1Q15615 310 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 MIAQ16674 131 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 KCTD21Q4G0X4 260 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 CFAP157Q5JU67 520 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 Q5VV11 94 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 TMEM236Q5W0B7 351 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 TMEM154Q6P9G4 183 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 LCN15Q6UWW0 184 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 PLEKHG7Q6ZR37 379 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 MRPL55Q7Z7F7 128 aaKnown RBP-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 PRNTQ86SH4 94 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 SNX29P2Q8IUI4 249 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 CCDC65Q8IXS2 484 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 OR6V1Q8N148 313 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 STKLD1Q8NE28 680 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 OR4A15Q8NGL6 344 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 OR2G2Q8NGZ5 317 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 KIF18AQ8NI77 898 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 TTC8Q8TAM2 541 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 METTL6Q8TCB7 284 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 STMN2Q93045 179 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 CHMP4CQ96CF2 233 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 RAB39BQ96DA2 213 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 REEP6Q96HR9 211 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 MRFAP1L1Q96HT8 127 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 YPEL4Q96NS1 127 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 MS4A4EQ96PG1 132 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 RMDN3Q96TC7 470 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 CHP1Q99653 195 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 APOL4Q9BPW4 351 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 MICU1Q9BPX6 476 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 SLC30A2Q9BRI3 323 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 UTP23Q9BRU9 249 aaKnown RBP-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 ATG101Q9BSB4 218 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 PPA2Q9H2U2 334 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 POMKQ9H5K3 350 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 MRM3Q9HC36 420 aaKnown RBP-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 TUFT1Q9NNX1 390 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 BIN3Q9NQY0 253 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 TMEM242Q9NWH2 141 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 NMRK1Q9NWW6 199 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 TAS2R10Q9NYW0 307 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 GDE1Q9NZC3 331 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 SNX7Q9UNH6 387 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 TIMM10BQ9Y5J6 103 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 N6AMT1Q9Y5N5 214 aa-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 CHCHD2Q9Y6H1 151 aaPredicted RBP-1.73□□□□□ -2.69
CDKL5-210ENST00000636046 POLR3AO14802 1390 aaPredicted RBP-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms