RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 EMC3Q9P0I2 261 aa0.87□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TAC3Q9UHF0 121 aa0.87□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 VPREB3Q9UKI3 123 aa0.87□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 POLR1DQ9Y2S0 133 aa0.87□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LINC00588Q9Y4M8 146 aa0.87□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZNF706Q9Y5V0 76 aaPredicted RBP0.87□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 R4GN34 69 aa0.87□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PTPRSQ13332 1948 aa0.87□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ANKRD31Q8N7Z5 1873 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CCDC88CQ9P219 2028 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 NUP155O75694 1391 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PIK3C2AO00443 1686 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 COL4A5P29400 1685 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 IGHV1-45A0A0A0MS14 117 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 A0A0G2JMP0 313 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 A0A0X1KG70 313 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PQLC2LA1A4F0 135 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SMIM23A6NLE4 172 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 A8MWL6 223 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 A8MWP4 228 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 EVPLLA8MZ36 301 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 E7EQL1 145 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PFDN6O15212 129 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SSNA1O43805 119 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ATP6V1G2O95670 118 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PDYNP01213 254 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PRB1P04280 392 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 REG1AP05451 166 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CRYBA1P05813 215 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SNRPAP09012 282 aaKnown RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SEC11BP0C7V7 166 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LINC00614P0C842 121 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 GTF2F2P13984 249 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ATF1P18846 271 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CFL1P23528 166 aaKnown RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 GADD45AP24522 165 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CDK2P24941 298 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DDTP30046 118 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 AGTR1P30556 359 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PYCR1P32322 319 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 HSPA9P38646 679 aaKnown RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 MARCKSL1P49006 195 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ACOT2P49753 483 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SERPINB9P50453 376 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DAPP51397 102 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR4D2P58180 307 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 POLR2GP62487 172 aaKnown RBP eCLIP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 REEP5Q00765 189 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SMAGPQ0VAQ4 97 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TMEM267Q0VDI3 215 aaPredicted RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 LAMTOR4Q0VGL1 99 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 GUK1Q16774 197 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 AKIRIN2Q53H80 203 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PYCR3Q53H96 274 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CLVS2Q5SYC1 327 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 C1orf194Q5T5A4 169 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 HIST2H3PS2Q5TEC6 136 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 GLT6D1Q7Z4J2 308 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR6V1Q8N148 313 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 C12orf45Q8N5I9 185 aaPredicted RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZDHHC22Q8N966 263 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TMEM75Q8N9X5 138 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PXT1Q8NFP0 134 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR2Z1Q8NG97 314 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR2K2Q8NGT1 345 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR11L1Q8NGX0 322 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR10X1Q8NGY0 326 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR4X1Q8NH49 305 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR5K1Q8NHB7 308 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 JOSD2Q8TAC2 188 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 KCTD4Q8WVF5 259 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 RNASE6Q93091 150 aaKnown RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TMBIM1Q969X1 311 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TESCQ96BS2 214 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ACY3Q96HD9 319 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PYURFQ96I23 114 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CCDC42Q96M95 316 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 YPEL4Q96NS1 127 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR7D2Q96RA2 312 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 MRPL20Q9BYC9 149 aaKnown RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 SLC25A31Q9H0C2 315 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 GTSF1LQ9H1H1 148 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 OR2D2Q9H210 308 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ABCG5Q9H222 651 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 C11orf49Q9H6J7 331 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DMAC2Q9NW81 257 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 PAQR5Q9NXK6 330 aaPredicted RBP0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 POMPQ9Y244 141 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 EVC2Q86UK5 1308 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 DOCK6Q96HP0 2047 aa0.86□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 ZFHX2Q9C0A1 2572 aaPredicted RBP0.85□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 TGIF2-C20orf24A0A0A6YYL0 155 aa0.85□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 FAM159BA6NKW6 160 aa0.85□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 IGLL5B9A064 214 aa0.85□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 H3BP45 60 aa0.85□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 H3BSA7 217 aa0.85□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 FAAHO00519 579 aa0.85□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 COPEO14579 308 aa0.85□□□□□ -2.27
NPHP3-ACAD11-202ENST00000632629 STX10O60499 249 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms