RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	ERVS71-1	P61550	626 aa		13	□□□□□ -0.33
BBS1-225	ENST00000630659	HERV-K104	P61576	105 aa		13	□□□□□ -0.33
BBS1-225	ENST00000630659	RPP30	P78346	268 aa	Known RBP	13	□□□□□ -0.33
BBS1-225	ENST00000630659	SLC25A24	Q6NUK1	477 aa		13	□□□□□ -0.33
BBS1-225	ENST00000630659	RNF144B	Q7Z419	303 aa		13	□□□□□ -0.33
BBS1-225	ENST00000630659	SLC35E1	Q96K37	410 aa		13	□□□□□ -0.33
BBS1-225	ENST00000630659		Q96M66	194 aa		13	□□□□□ -0.33
BBS1-225	ENST00000630659	TMEM106B	Q9NUM4	274 aa		13	□□□□□ -0.33
BBS1-225	ENST00000630659	RTTN	Q86VV8	2226 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	TRAV39	A0A0B4J263	110 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	MMP23A	O75900	390 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	OMG	P23515	440 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	ARR3	P36575	388 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	ZNF695	Q8IW36	515 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	C11orf42	Q8N5U0	333 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	SCGB1C1	Q8TD33	95 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	TAAR6	Q96RI8	345 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	TRIB1	Q96RU8	372 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	PCGF1	Q9BSM1	259 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	PARD6G	Q9BYG4	376 aa	Predicted RBP	12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	ZNF665	Q9H7R5	613 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	ZNF286A	Q9HBT8	521 aa		12.99	□□□□□ -0.33
BBS1-225	ENST00000630659	NKX2-6	A6NCS4	301 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	CEBPZOS	A8MTT3	80 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	GZMH	P20718	246 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	RPL23	P62829	140 aa	Known RBP	12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	RUNX1	Q01196	453 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	ID3	Q02535	119 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	PHLDA2	Q53GA4	152 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659		Q6ZS92	163 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	C6orf201	Q7Z4U5	140 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	OR4B1	Q8NGF8	309 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	OR1K1	Q8NGR3	316 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	MRGPRD	Q8TDS7	321 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	EXTL1	Q92935	676 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	IL22RA2	Q969J5	263 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	VAMP8	Q9BV40	100 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	C1QTNF5	Q9BXJ0	243 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	ARHGAP21	Q5T5U3	1957 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	MPPED1	O15442	326 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	ZNHIT1	O43257	154 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	GFRA3	O60609	400 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	ESD	P10768	282 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	CHRNB4	P30926	498 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	MEF2B	Q02080	365 aa	Predicted RBP	12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	TOMM20L	Q6UXN7	152 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	OR5D18	Q8NGL1	313 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	REPIN1	Q9BWE0	567 aa	Known RBP	12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	OR51B6	Q9H340	312 aa		12.98	□□□□□ -0.33
BBS1-225	ENST00000630659	ZNF503-AS2	A6NEH8	195 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	YPEL1	O60688	119 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	FXYD4	P59646	89 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	GNB2	P62879	340 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	COLCA1	Q6ZS62	124 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	BCL2L2	Q92843	193 aa	Predicted RBP	12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	YPEL2	Q96QA6	119 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	SCNM1	Q9BWG6	230 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	LIME1	Q9H400	295 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	RFNG	Q9Y644	331 aa		12.97	□□□□□ -0.33
BBS1-225	ENST00000630659	NKX6-3	A6NJ46	265 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	CST7	O76096	145 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	CD55	P08174	381 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	SLC25A6	P12236	298 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	VDAC1	P21796	283 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	TMEM41B	Q5BJD5	291 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	MEX3B	Q6ZN04	569 aa	Known RBP	12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	FAM214B	Q7L5A3	538 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	SMIM15	Q7Z3B0	74 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	CMTM2	Q8TAZ6	248 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	SPSB4	Q96A44	273 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	RAB40C	Q96S21	281 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	MAGT1	Q9H0U3	335 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	MANBAL	Q9NQG1	85 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	RPRM	Q9NS64	109 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	SSUH2	Q9Y2M2	353 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	AKAP13	Q12802	2813 aa		12.96	□□□□□ -0.33
BBS1-225	ENST00000630659	hCG_38984	A0A1B0GV85	526 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	AHRR	A9YTQ3	701 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	ATXN7	O15265	892 aa	Predicted RBP	12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	SELE	P16581	610 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	MDH2	P40926	338 aa	Known RBP	12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	PLP2	Q04941	152 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	GUSBP1	Q15486	140 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	DMRTC1	Q5HYR2	192 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	TPTE2P1	Q5T6R2	138 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	CRIP3	Q6Q6R5	217 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	NANOS1	Q8WY41	292 aa	Known RBP	12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	SDSL	Q96GA7	329 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	TP53RK	Q96S44	253 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	PXMP4	Q9Y6I8	212 aa		12.96	□□□□□ -0.34
BBS1-225	ENST00000630659	URB1	O60287	2271 aa	Known RBP	12.95	□□□□□ -0.34
BBS1-225	ENST00000630659	MED12L	Q86YW9	2145 aa		12.95	□□□□□ -0.34
BBS1-225	ENST00000630659	C5orf49	A4QMS7	147 aa		12.95	□□□□□ -0.34
BBS1-225	ENST00000630659	ZNF737	O75373	536 aa		12.95	□□□□□ -0.34
BBS1-225	ENST00000630659	CCNO	P22674	350 aa		12.95	□□□□□ -0.34
BBS1-225	ENST00000630659	PSMB3	P49720	205 aa		12.95	□□□□□ -0.34
BBS1-225	ENST00000630659	ODF3L1	Q8IXM7	274 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms