RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 HTR5AP47898 357 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 NPY4RP50391 375 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 SNU13P55769 128 aaKnown RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 CYCSP99999 105 aaKnown RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 PSG4Q00888 419 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 SLC9A3R2Q15599 337 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 LRRC37A5PQ49AS3 106 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 FAM74A1Q5RGS3 127 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 HIST2H2BDQ6DRA6 164 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 BTNL3Q6UXE8 466 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 UNQ6126/PRO20091Q6UXV3 157 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 STPG2Q8N412 459 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 ZSCAN4Q8NAM6 433 aaPredicted RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 POC1AQ8NBT0 407 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 OR5AP2Q8NGF4 316 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 OR10K1Q8NGX5 313 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 THAP6Q8TBB0 222 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 EMG1Q92979 244 aaKnown RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 SPSB1Q96BD6 273 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 RRNAD1Q96FB5 475 aaKnown RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 SCGB3A2Q96PL1 93 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 OR2V2Q96R30 315 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 CHMP1AQ9HD42 196 aaPredicted RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 CYTL1Q9NRR1 136 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 UFSP2Q9NUQ7 469 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM100Q9NV29 134 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 IGKV1-27A0A075B6S5 117 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 IGKV1D-8A0A087WSZ0 117 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 A0A1B0GW55 424 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 LGALS8O00214 317 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 SGCEO43556 437 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 TSPAN9O75954 239 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 DUX4L2P0CJ85 424 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 DUX4L3P0CJ86 424 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 DUX4L4P0CJ87 422 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 DUX4L5P0CJ88 424 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 DUX4L6P0CJ89 424 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 DUX4L7P0CJ90 424 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 SERPINA2P20848 420 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 BLVRBP30043 206 aaPredicted RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 CD80P33681 288 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 HOXA4Q00056 320 aaPredicted RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 ARFRP1Q13795 201 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 ATXN7L3Q14CW9 347 aaPredicted RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 PAN3Q58A45 887 aaKnown RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 RUSC1-AS1Q66K80 236 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 KCTD9Q7L273 389 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 OR1F12Q8NHA8 337 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 NPRL2Q8WTW4 380 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 AQP10Q96PS8 301 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 DUX4Q9UBX2 424 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 GLS2Q9UI32 602 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 hCG_38984A0A1B0GV85 526 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 FAM25EA8MYX2 175 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 TEX46H3BTG2 121 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 PGAM2P15259 253 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 TNFRSF1AP19438 455 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 PRB3Q04118 309 aaPredicted RBP3.97□□□□□ -1.77
LINC00550-201ENST00000629293 SCRN3Q0VDG4 424 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 PSG7Q13046 419 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 DEFB112Q30KQ8 113 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 DMRTC1Q5HYR2 192 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 GPR157Q5UAW9 335 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 OR2T2Q6IF00 324 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 PRSS54Q6PEW0 395 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM17Q86X19 198 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 CSNK2A3Q8NEV1 391 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 POM121L2Q96KW2 1035 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 TECTBQ96PL2 329 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 SSBP3Q9BWW4 388 aaPredicted RBP3.97□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF471Q9BX82 626 aaPredicted RBP3.97□□□□□ -1.77
LINC00550-201ENST00000629293 PATZ1Q9HBE1 687 aaKnown RBP3.97□□□□□ -1.77
LINC00550-201ENST00000629293 EHFQ9NZC4 300 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 IL36GQ9NZH8 169 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF391Q9UJN7 358 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 A0A1W2PRD5 423 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 A0A1W2PRF3 423 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 A0A1W2PRM7 423 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 C5orf51A6NDU8 294 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 MPTX1A8MV57 137 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 TSPAN4O14817 238 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 ADAP1O75689 374 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 MMP7P09237 267 aaPredicted RBP3.97□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF273Q14593 569 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 C6orf201Q7Z4U5 140 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 C1orf174Q8IYL3 243 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 SPERTQ8NA61 448 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 INO80EQ8NBZ0 244 aaPredicted RBP3.97□□□□□ -1.77
LINC00550-201ENST00000629293 LHFPL5Q8TAF8 219 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 REEP6Q96HR9 211 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 ST6GALNAC5Q9BVH7 336 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 OR2H1Q9GZK4 316 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 GPR173Q9NS66 373 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 STARD10Q9Y365 291 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 INSIG2Q9Y5U4 225 aa3.97□□□□□ -1.77
LINC00550-201ENST00000629293 RAB19A4D1S5 217 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 MSGN1A6NI15 193 aa3.96□□□□□ -1.77
LINC00550-201ENST00000629293 SDCBPO00560 298 aaPredicted RBP3.96□□□□□ -1.77
LINC00550-201ENST00000629293 CTSDP07339 412 aaPredicted RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms