RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 DEFB108BQ8NET1 73 aa13.55□□□□□ -0.24
LDB3-208ENST00000623007 LINC01560Q8TB33 94 aa13.55□□□□□ -0.24
LDB3-208ENST00000623007 TMED6Q8WW62 240 aa13.55□□□□□ -0.24
LDB3-208ENST00000623007 CCL17Q92583 94 aa13.55□□□□□ -0.24
LDB3-208ENST00000623007 GNPNAT1Q96EK6 184 aaPredicted RBP13.55□□□□□ -0.24
LDB3-208ENST00000623007 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
LDB3-208ENST00000623007 CADP27708 2225 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 A8MXK9 166 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 ST8SIA5O15466 376 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 TFF1P04155 84 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 EPHA1P21709 976 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 ZP3P21754 424 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 DUTP33316 252 aaKnown RBP13.54□□□□□ -0.24
LDB3-208ENST00000623007 THBS3P49746 956 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 SULT1A1P50225 295 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 HBG1P69891 147 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 HBG2P69892 147 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 MRPS11P82912 194 aaKnown RBP13.54□□□□□ -0.24
LDB3-208ENST00000623007 MST1LQ2TV78 715 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 C4orf17Q53FE4 359 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 TOR2AQ5JU69 321 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 H2BFWTQ7Z2G1 175 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 CCDC28AQ8IWP9 274 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 STPG2Q8N412 459 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 C8orf31Q8N9H6 132 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 MARC2Q969Z3 335 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 S1PR3Q99500 378 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 STRAPQ9Y3F4 350 aaKnown RBP13.54□□□□□ -0.24
LDB3-208ENST00000623007 TANC2Q9HCD6 1990 aa13.54□□□□□ -0.24
LDB3-208ENST00000623007 TRBV23-1A0A0A0MS06 115 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 IGHV3-43A0A0B4J1X8 118 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 A0A1W2PPH5 198 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 UMAD1C9J7I0 102 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 TRIM77I1YAP6 450 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 ZG16O60844 167 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 IGHV3-43DP0DP04 118 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 NDUFB7P17568 137 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 ERVK-16P61578 105 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 HOXA4Q00056 320 aaPredicted RBP13.53□□□□□ -0.24
LDB3-208ENST00000623007 FAM201AQ5SY85 155 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 OR1S2Q8NGQ3 325 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 OR4S2Q8NH73 311 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 CXorf58Q96LI9 332 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 DCTN5Q9BTE1 182 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 RAB1BQ9H0U4 201 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 BARX1Q9HBU1 254 aaPredicted RBP13.53□□□□□ -0.24
LDB3-208ENST00000623007 HSPB7Q9UBY9 170 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 RPUSD1Q9UJJ7 312 aaKnown RBP13.53□□□□□ -0.24
LDB3-208ENST00000623007 KIAA2026Q5HYC2 2103 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 ZNF705EA8MWA4 302 aaPredicted RBP13.53□□□□□ -0.24
LDB3-208ENST00000623007 KIAA1324LA8MWY0 1029 aaPredicted RBP13.53□□□□□ -0.24
LDB3-208ENST00000623007 TNFRSF13BO14836 293 aaPredicted RBP13.53□□□□□ -0.24
LDB3-208ENST00000623007 P0C879 139 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 FAM157CP0CG43 387 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 SPP1P10451 314 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 RPL31P62899 125 aaKnown RBP13.53□□□□□ -0.24
LDB3-208ENST00000623007 FAM74A1Q5RGS3 127 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 FAM71F2Q6NXP2 309 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 COMMD1Q8N668 190 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 FAM216BQ8N7L0 139 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 ZNF714Q96N38 554 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 IFI27L2Q9H2X8 130 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 PARP11Q9NR21 331 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 MMP26Q9NRE1 261 aa13.53□□□□□ -0.24
LDB3-208ENST00000623007 POLEQ07864 2286 aa13.52□□□□□ -0.25
LDB3-208ENST00000623007 FAM24AA6NFZ4 105 aa13.52□□□□□ -0.25
LDB3-208ENST00000623007 SHOXO15266 292 aa13.52□□□□□ -0.25
LDB3-208ENST00000623007 TXNL1O43396 289 aa13.52□□□□□ -0.25
LDB3-208ENST00000623007 F2RL1P55085 397 aa13.52□□□□□ -0.25
LDB3-208ENST00000623007 RPL30P62888 115 aaKnown RBP13.52□□□□□ -0.25
LDB3-208ENST00000623007 LY6DQ14210 128 aa13.52□□□□□ -0.25
LDB3-208ENST00000623007 DHRS7BQ6IAN0 325 aaPredicted RBP13.52□□□□□ -0.25
LDB3-208ENST00000623007 HEPN1Q6WQI6 88 aa13.52□□□□□ -0.25
LDB3-208ENST00000623007 PCNPQ8WW12 178 aaKnown RBP13.52□□□□□ -0.25
LDB3-208ENST00000623007 A0A0G2JRQ6 117 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 DEFB108AA8MXU0 73 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 M0R1X1 148 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 ATXN7O15265 892 aaPredicted RBP13.51□□□□□ -0.25
LDB3-208ENST00000623007 KRASP01116 189 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 IFNA5P01569 189 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 NQO2P16083 231 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 UBE2KP61086 200 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 RPP30P78346 268 aaKnown RBP13.51□□□□□ -0.25
LDB3-208ENST00000623007 NHLH2Q02577 135 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 TNFRSF9Q07011 255 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 AARDQ4LEZ3 155 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 OR52E5Q8NH55 327 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 NEU4Q8WWR8 484 aaPredicted RBP13.51□□□□□ -0.25
LDB3-208ENST00000623007 ATP5SQ99766 215 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 SMIM3Q9BZL3 60 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 MAGT1Q9H0U3 335 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 CBLN4Q9NTU7 201 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 PSENENQ9NZ42 101 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 MGAQ8IWI9 3026 aa13.51□□□□□ -0.25
LDB3-208ENST00000623007 PRRC2CQ9Y520 2896 aaKnown RBP13.51□□□□□ -0.25
LDB3-208ENST00000623007 IGSF23A1L1A6 192 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 MARCH11A6NNE9 402 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 C17orf98A8MV24 154 aa13.5□□□□□ -0.25
LDB3-208ENST00000623007 RAMP3O60896 148 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms