RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CCDC112Q8NEF3 446 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 SLC22A4Q9H015 551 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 C19orf12Q9NSK7 152 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 FIS1Q9Y3D6 152 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 VWA8A3KMH1 1905 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 EIF3AQ14152 1382 aaKnown RBP2.36□□□□□ -2.03
CPNE3-213ENST00000622183 RIMS2Q9UQ26 1411 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 PBRM1Q86U86 1689 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 HBZP02008 142 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 OR4E1P0C645 316 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 CD36P16671 472 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 CD79BP40259 229 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 CDC34P49427 236 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-213ENST00000622183 SERPINB9P50453 376 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 H2BFSP57053 126 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 AP1S1P61966 158 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 ARF6P62330 175 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 MESTQ5EB52 335 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 CDKL4Q5MAI5 379 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 FAM19A5Q7Z5A7 132 aaPredicted RBP2.35□□□□□ -2.03
CPNE3-213ENST00000622183 NATD1Q8N6N6 113 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 PYDC1Q8WXC3 89 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 CMTM5Q96DZ9 223 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 SMIM19Q96E16 107 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 ACY3Q96HD9 319 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 OR7D2Q96RA2 312 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 MED18Q9BUE0 208 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 GNB1LQ9BYB4 327 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 MROQ9BYG7 248 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 PARVAQ9NVD7 372 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 GINS2Q9Y248 185 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 CARHSP1Q9Y2V2 147 aaKnown RBP2.35□□□□□ -2.03
CPNE3-213ENST00000622183 NUBP2Q9Y5Y2 271 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 CASZ1Q86V15 1759 aa2.35□□□□□ -2.03
CPNE3-213ENST00000622183 ARHGAP31Q2M1Z3 1444 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 RRBP1Q9P2E9 1410 aaKnown RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 CEP152O94986 1710 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 TINCRA0A1B0GVN0 87 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 E5RI56 91 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 H0YJX3 145 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 AZIN1O14977 448 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 SLC22A1O15245 554 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 NOS1APO75052 506 aaPredicted RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 DHFRP00374 187 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 KRT7P08729 469 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 LINC00614P0C842 121 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 OR13C7P0DN81 318 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 COX5BP10606 129 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 CDK2P24941 298 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 COILP38432 576 aaPredicted RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 HSPA9P38646 679 aaKnown RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 OR1E2P47887 323 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 CDK9P50750 372 aaKnown RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 RAP1GDS1P52306 607 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 AKR1C2P52895 323 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 ACTBP60709 375 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 ACTG1P63261 375 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 BRMS1LQ5PSV4 323 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 IDO2Q6ZQW0 420 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 TCF24Q7RTU0 167 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 CLVS1Q8IUQ0 354 aaPredicted RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 OR10P1Q8NGE3 313 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 OR10D4PQ8NGN7 298 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 CYGBQ8WWM9 190 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 TLCD1Q96CP7 247 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 ABHD14BQ96IU4 210 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 ANKRD36BP1Q96IX9 119 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 MED28Q9H204 178 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 MS4A6AQ9H2W1 248 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 MRPL40Q9NQ50 206 aaKnown RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 FAM206AQ9NX38 181 aa2.34□□□□□ -2.03
CPNE3-213ENST00000622183 MRPS16Q9Y3D3 137 aaKnown RBP2.34□□□□□ -2.03
CPNE3-213ENST00000622183 CRB1P82279 1406 aa2.34□□□□□ -2.04
CPNE3-213ENST00000622183 DNMT1P26358 1616 aaKnown RBP2.33□□□□□ -2.04
CPNE3-213ENST00000622183 PVALEFA0A1B0GWK0 134 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 IGSF23A1L1A6 192 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 A8MWP6 167 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 TMEM114B3SHH9 223 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 E7EQL1 145 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 F5H768 121 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 COPEO14579 308 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 CRYZL1O95825 349 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 CRYBA1P05813 215 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 UGT2B7P16662 529 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 MIPP30301 263 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 SERPINB1P30740 379 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 IFNGR2P38484 337 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 CDKN2CP42773 168 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 GABRA4P48169 554 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 CEBPGP53567 150 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 LINC00313P59037 77 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 MAGOHP61326 146 aaKnown RBP2.33□□□□□ -2.04
CPNE3-213ENST00000622183 MRPS25P82663 173 aaKnown RBP2.33□□□□□ -2.04
CPNE3-213ENST00000622183 TNFRSF9Q07011 255 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 DEFB115Q30KQ5 88 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 LCN8Q6JVE9 175 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 C3orf33Q6P1S2 294 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 TMPPEQ6ZT21 453 aa2.33□□□□□ -2.04
CPNE3-213ENST00000622183 OR10D3Q8NH80 312 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms