RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 OR56B1Q8NGI3 324 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 AGMATQ9BSE5 352 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 TOLLIPQ9H0E2 274 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 FBXL15Q9H469 300 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 LSM2Q9Y333 95 aaKnown RBP9.24□□□□□ -0.93
UPF3B-204ENST00000619445 NUBP2Q9Y5Y2 271 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 H3BUA1 57 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 SAP30O75446 220 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 CEACAM6P40199 344 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 GNB1P62873 340 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 MRPS15P82914 257 aaKnown RBP9.24□□□□□ -0.93
UPF3B-204ENST00000619445 CBX3Q13185 183 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 TPBGQ13641 420 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 RAB11BQ15907 218 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 MOGAT2Q3SYC2 334 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 PPP1R27Q86WC6 154 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 PDPNQ86YL7 162 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 DCUN1D4Q92564 292 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 RITA1Q96K30 269 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 TMEM68Q96MH6 324 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 OR5B12Q96R08 314 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 NICN1Q9BSH3 213 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 ELOVL1Q9BW60 279 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 C11orf54Q9H0W9 315 aaPredicted RBP9.24□□□□□ -0.93
UPF3B-204ENST00000619445 LPAR5Q9H1C0 372 aa9.24□□□□□ -0.93
UPF3B-204ENST00000619445 KMT2CQ8NEZ4 4911 aaKnown RBP9.23□□□□□ -0.93
UPF3B-204ENST00000619445 A0A0G2JLM5 398 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 HSPB1P04792 205 aaKnown RBP9.23□□□□□ -0.93
UPF3B-204ENST00000619445 LGALS7P47929 136 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 PITPNAQ00169 270 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 NDPQ00604 133 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 INSL4Q14641 139 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 RPL39P5Q59GN2 51 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 ASPHD1Q5U4P2 390 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 LIPKQ5VXJ0 399 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 ACSM6Q6P461 480 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 UNQ5815/PRO19632Q6UWF5 114 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 ABHD14BQ96IU4 210 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 OR4C12Q96R67 309 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 CMSS1Q9BQ75 279 aaKnown RBP9.23□□□□□ -0.93
UPF3B-204ENST00000619445 Q9N2K0 584 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 METTL1Q9UBP6 276 aaKnown RBP9.23□□□□□ -0.93
UPF3B-204ENST00000619445 AK3Q9UIJ7 227 aa9.23□□□□□ -0.93
UPF3B-204ENST00000619445 ZP3P21754 424 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 TPPP2P59282 170 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 RPS16P62249 146 aaKnown RBP9.22□□□□□ -0.93
UPF3B-204ENST00000619445 MLLT11Q13015 90 aaPredicted RBP9.22□□□□□ -0.93
UPF3B-204ENST00000619445 IRF3Q14653 427 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 PSG5Q15238 335 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 P2RY14Q15391 338 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 OR4A4PQ8NGN8 299 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 ARPC1AQ92747 370 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 DLX4Q92988 240 aaPredicted RBP9.22□□□□□ -0.93
UPF3B-204ENST00000619445 ACOT13Q9NPJ3 140 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 A3GALT2U3KPV4 340 aa9.22□□□□□ -0.93
UPF3B-204ENST00000619445 TRDCB7Z8K6 153 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 SOCS1O15524 211 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 RGS10O43665 173 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 SOX15O60248 233 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 BRI3O95415 125 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 HSMCR30P0CW71 290 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 ARL6IP1Q15041 203 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 GLDNQ6ZMI3 551 aaPredicted RBP9.21□□□□□ -0.94
UPF3B-204ENST00000619445 FAM3DQ96BQ1 224 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 DUSP21Q9H596 190 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 ZMAT4Q9H898 229 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 RANGRFQ9HD47 186 aaPredicted RBP9.21□□□□□ -0.94
UPF3B-204ENST00000619445 RAB22AQ9UL26 194 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 STUB1Q9UNE7 303 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 GAB2Q9UQC2 676 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 FBXO7Q9Y3I1 522 aa9.21□□□□□ -0.94
UPF3B-204ENST00000619445 A0A0A6YYD4 124 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 C13orf42A0A1B0GVH6 325 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 FOXI3A8MTJ6 420 aaPredicted RBP9.2□□□□□ -0.94
UPF3B-204ENST00000619445 FCN1O00602 326 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 PDCD5O14737 125 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 DENRO43583 198 aaKnown RBP9.2□□□□□ -0.94
UPF3B-204ENST00000619445 CNIH1O95406 144 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 CA2P00918 260 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 TRGV3P03979 118 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 SCTP09683 121 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 CD3GP09693 182 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 RRASP10301 218 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 EGR2P11161 476 aaPredicted RBP9.2□□□□□ -0.94
UPF3B-204ENST00000619445 GP9P14770 177 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 AADACP22760 399 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 GADD45AP24522 165 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 CALRP27797 417 aaKnown RBP9.2□□□□□ -0.94
UPF3B-204ENST00000619445 VEGFCP49767 419 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 FXYD3Q14802 87 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 TMEM91Q6ZNR0 172 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 PRSS48Q7RTY5 328 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 C5orf24Q7Z6I8 188 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 POC5Q8NA72 575 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 LFNGQ8NES3 379 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 OR10J5Q8NHC4 309 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 TMEM203Q969S6 136 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 RHOVQ96L33 236 aa9.2□□□□□ -0.94
UPF3B-204ENST00000619445 PECRQ9BY49 303 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms