RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 SF3B5Q9BWJ5 86 aaKnown RBP5.21□□□□□ -1.57
RFX3-212ENST00000617270 PEF1Q9UBV8 284 aaKnown RBP5.21□□□□□ -1.57
RFX3-212ENST00000617270 RRHO14718 337 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 ISG15P05161 165 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 ATP5G2Q06055 141 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 PMS2CLQ68D20 193 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 TP53I13Q8NBR0 393 aaPredicted RBP5.21□□□□□ -1.58
RFX3-212ENST00000617270 DNASE2BQ8WZ79 361 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 RBKSQ9H477 322 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 TNFSF18Q9UNG2 199 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 H0YL77 283 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 TRGC1P0CF51 173 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 SAA1P0DJI8 122 aaPredicted RBP5.21□□□□□ -1.58
RFX3-212ENST00000617270 RPS20P60866 119 aaKnown RBP5.21□□□□□ -1.58
RFX3-212ENST00000617270 CKS1BP61024 79 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 TUBA4BQ9H853 241 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 KCNK7Q9Y2U2 307 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 MUC21A0A0G2JKD1 596 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 MUC21A0A140T8X8 626 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 M0R381 172 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 IGLV3-27P01718 113 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 COX6B1P14854 86 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 ZNF345Q14585 488 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 MUC21Q5SSG8 566 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 SAPCD1Q5SSQ6 148 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 TMEM30AQ9NV96 361 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 CCDC88AQ3V6T2 1871 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 SPTA1P02549 2419 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 NUP188Q5SRE5 1749 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 IGHV4-39P01824 125 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 GAPDHP04406 335 aaKnown RBP5.21□□□□□ -1.58
RFX3-212ENST00000617270 CCL3P10147 92 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 STARD6P59095 220 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 PSMG3Q9BT73 122 aaPredicted RBP5.21□□□□□ -1.58
RFX3-212ENST00000617270 TNFRSF18Q9Y5U5 241 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 PRR32B1ATL7 298 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 PRR35P0CG20 571 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 RPS11P62280 158 aaKnown RBP eCLIP5.21□□□□□ -1.58
RFX3-212ENST00000617270 ZNF658BQ4V348 819 aaPredicted RBP5.21□□□□□ -1.58
RFX3-212ENST00000617270 C9orf50Q5SZB4 431 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 FAM159AQ6UWV7 190 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 GOLT1AQ6ZVE7 132 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 DERL1Q9BUN8 251 aa5.21□□□□□ -1.58
RFX3-212ENST00000617270 IGKV3D-20A0A0C4DH25 116 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 C17orf51A8MQB3 221 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 SMAD7O15105 426 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 ZNF600Q6ZNG1 722 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 MARVELD3Q96A59 401 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 C10orf35Q96D05 121 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 VIRMAQ69YN4 1812 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 HOXA5P20719 270 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 FOXA3P55318 350 aaPredicted RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 LSM6P62312 80 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 WNT10AQ9GZT5 417 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 FLRT3Q9NZU0 649 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 DIDO1Q9BTC0 2240 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 RBMY1BA6NDE4 496 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 RBMY1EA6NEQ0 496 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 RBMY1DP0C7P1 496 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 RBMY1A1P0DJD3 496 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 RBMY1CP0DJD4 496 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 CNTFRP26992 372 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 SERF2P84101 59 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 QTRT1Q9BXR0 403 aaKnown RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 OPN3Q9H1Y3 402 aaPredicted RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 APOMO95445 188 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 CTAG1AP78358 180 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 DCAF12L2Q5VW00 463 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 FBXW9Q5XUX1 488 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 CADM4Q8NFZ8 388 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 PHLDA1Q8WV24 401 aaPredicted RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 WNT2BQ93097 391 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 OR5AC2Q9NZP5 309 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 NWD2Q9ULI1 1742 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 IGHV3-66A0A0C4DH42 116 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 H3BRM9 83 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 TNFSF14O43557 240 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 CA11O75493 328 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 TDGF1P13385 188 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 MALP21145 153 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 TNFSF10P50591 281 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 MMD2Q8IY49 270 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 DIRC2Q96SL1 478 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 TUBD1Q9UJT1 453 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 IGHV3-49A0A0A0MS15 119 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 TRAV8-2A0A0B4J237 113 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 IGHV3-48P01763 117 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 CD1AP06126 327 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 CRYBB3P26998 211 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 TMEM106BQ9NUM4 274 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 MYOM1P52179 1685 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 TRAV24A0A0B4J272 114 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 CTGFP29279 349 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 SELENOTP62341 195 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 ITLN2Q8WWU7 325 aaPredicted RBP5.2□□□□□ -1.58
RFX3-212ENST00000617270 C2orf88Q9BSF0 95 aa5.2□□□□□ -1.58
RFX3-212ENST00000617270 MOSP00540 346 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 SFTPCP11686 197 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 FCARP24071 287 aa5.19□□□□□ -1.58
RFX3-212ENST00000617270 FAM209AQ5JX71 171 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms