RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 AWAT1Q58HT5 328 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 ZNF695Q8IW36 515 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 LRRC29Q8WV35 223 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 MMP26Q9NRE1 261 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 TUBD1Q9UJT1 453 aa13.09□□□□□ -0.31
SEMA3B-212ENST00000616701 A0A0G2JNJ9 132 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 ITGB1BP1O14713 200 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 GFRA3O60609 400 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 DEDDO75618 318 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 CRYAAP02489 173 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 RPL7L1Q6DKI1 246 aaKnown RBP13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 ACP7Q6ZNF0 438 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 TAAR3PQ9P1P4 343 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 Q9UFV3 132 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 KCNS2Q9ULS6 477 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 OR2W1Q9Y3N9 320 aa13.08□□□□□ -0.31
SEMA3B-212ENST00000616701 IGHV3OR15-7A0A075B7D8 119 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 K7EPK0 472 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 PRRG2O14669 202 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 CTXN2P0C2S0 81 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 EGR1P18146 543 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 RPL12P30050 165 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 RPL29P47914 159 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 OR5I1Q13606 314 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 MBNL2Q5VZF2 373 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 H1FOOQ8IZA3 346 aaPredicted RBP13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 FAM71E2Q8N5Q1 922 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 OR1L1Q8NH94 360 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 RNF141Q8WVD5 230 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 AQP10Q96PS8 301 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 GAL3ST2Q9H3Q3 398 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 RHOFQ9HBH0 211 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 RPLP1P05386 114 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 ASCL1P50553 236 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 NHLH1Q02575 133 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 PJVKQ0ZLH3 352 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 IZUMO4Q1ZYL8 232 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 SNRNP40Q96DI7 357 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 SFXN3Q9BWM7 321 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 MAGT1Q9H0U3 335 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 RNF150Q9ULK6 438 aa13.08□□□□□ -0.32
SEMA3B-212ENST00000616701 TRBV6-6A0A0A6YYG2 114 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 A0A1W2PPQ1 181 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 C9JQL5 133 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 PGLYRP1O75594 196 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 OR8U9P0C7N5 309 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 CEACAM6P40199 344 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 GABRA2P47869 451 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 OR3A1P47881 315 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 COL10A1Q03692 680 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 SELENOHQ8IZQ5 122 aaKnown RBP13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 OR8U1Q8NH10 309 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 DCTN5Q9BTE1 182 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 HES4Q9HCC6 221 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 DNAJC4Q9NNZ3 241 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 ZZEF1O43149 2961 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 SMCO3A2RU48 225 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 ADAM20O43506 726 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 MST1LQ2TV78 715 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 FAM201AQ5SY85 155 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 BAP18Q8IXM2 172 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 CMTM1Q8IZ96 169 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 LRTM2Q8N967 370 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 MRGPRDQ8TDS7 321 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 ERGIC1Q969X5 290 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 PACRGQ96M98 296 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 VPS25Q9BRG1 176 aa13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 RCL1Q9Y2P8 373 aaKnown RBP13.07□□□□□ -0.32
SEMA3B-212ENST00000616701 NBASA2RRP1 2371 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 SEC14L6B5MCN3 397 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 EPHA1P21709 976 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 MDH2P40926 338 aaKnown RBP13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 EDDM3AQ14507 147 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 TESK1Q15569 626 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 OR10V1Q8NGI7 309 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 FBXL17Q9UF56 701 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 RNASEK-C17orf49H0YIS7 233 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 K7ENP7 123 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 CCKARP32238 428 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 GLIPR1P48060 266 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 GAGE1Q13065 139 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 LTC4SQ16873 150 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 RFESDQ8TAC1 157 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 OR2V2Q96R30 315 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 CABLES2Q9BTV7 478 aa13.06□□□□□ -0.32
SEMA3B-212ENST00000616701 PSG2P11465 335 aa13.05□□□□□ -0.32
SEMA3B-212ENST00000616701 TFPI2P48307 235 aa13.05□□□□□ -0.32
SEMA3B-212ENST00000616701 IL34Q6ZMJ4 242 aa13.05□□□□□ -0.32
SEMA3B-212ENST00000616701 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
SEMA3B-212ENST00000616701 WFDC8Q8IUA0 241 aa13.05□□□□□ -0.32
SEMA3B-212ENST00000616701 BEND2Q8NDZ0 799 aa13.05□□□□□ -0.32
SEMA3B-212ENST00000616701 OR52L2PQ8NGH6 319 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms