RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	FAM71F2	Q6NXP2	309 aa		18.62	■□□□□ 0.57
ACACA-238	ENST00000616352	LPCAT3	Q6P1A2	487 aa		18.62	■□□□□ 0.57
ACACA-238	ENST00000616352	GSX1	Q9H4S2	264 aa	Predicted RBP	18.62	■□□□□ 0.57
ACACA-238	ENST00000616352	GPR132	Q9UNW8	380 aa		18.62	■□□□□ 0.57
ACACA-238	ENST00000616352	VSIG4	Q9Y279	399 aa		18.62	■□□□□ 0.57
ACACA-238	ENST00000616352	HSD17B6	O14756	317 aa		18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	EIF4EBP1	Q13541	118 aa	Predicted RBP	18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	TPTE2P1	Q5T6R2	138 aa		18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	IL17REL	Q6ZVW7	336 aa		18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	NRARP	Q7Z6K4	114 aa		18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	BVES	Q8NE79	360 aa		18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	ZFAND2B	Q8WV99	257 aa		18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	AKR1E2	Q96JD6	320 aa		18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	DPAGT1	Q9H3H5	408 aa		18.61	■□□□□ 0.57
ACACA-238	ENST00000616352	FAM240B	A0A1B0GVZ2	78 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	PGAM2	P15259	253 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	EPHA1	P21709	976 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	CEACAM3	P40198	252 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	C9orf139	Q6ZV77	190 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	DYNAP	Q8N1N2	210 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	ZDHHC22	Q8N966	263 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	ZBTB34	Q8NCN2	500 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	S1PR3	Q99500	378 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	C5orf66	Q9H5L9	145 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	GPR31	O00270	319 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	ZNF816	Q0VGE8	651 aa	Predicted RBP	18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	ZFAND1	Q8TCF1	268 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	RPE	Q96AT9	228 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	MALSU1	Q96EH3	234 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	ZNF486	Q96H40	463 aa	Predicted RBP	18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	RTBDN	Q9BSG5	229 aa	Predicted RBP	18.6	■□□□□ 0.57
ACACA-238	ENST00000616352	OCEL1	Q9H607	264 aa		18.6	■□□□□ 0.57
ACACA-238	ENST00000616352		A0A0U1RQK1	487 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	TCRB	P04435	133 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	CTSD	P07339	412 aa	Predicted RBP	18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	PI3	P19957	117 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	REG1B	P48304	166 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	DUSP18	Q8NEJ0	188 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	ENKUR	Q8TC29	256 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	SCGB3A2	Q96PL1	93 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	COPZ2	Q9P299	210 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	HILPDA	Q9Y5L2	63 aa		18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	SOX21	Q9Y651	276 aa	Predicted RBP	18.59	■□□□□ 0.57
ACACA-238	ENST00000616352	OOSP1	A8MZH6	123 aa		18.58	■□□□□ 0.56
ACACA-238	ENST00000616352	PTTG1	O95997	202 aa		18.58	■□□□□ 0.56
ACACA-238	ENST00000616352	HNF1A	P20823	631 aa		18.58	■□□□□ 0.56
ACACA-238	ENST00000616352	SSX2	Q16385	188 aa		18.58	■□□□□ 0.56
ACACA-238	ENST00000616352	TGIF2LX	Q8IUE1	241 aa		18.58	■□□□□ 0.56
ACACA-238	ENST00000616352	GPHA2	Q96T91	129 aa		18.58	■□□□□ 0.56
ACACA-238	ENST00000616352	SLC2A9	Q9NRM0	540 aa		18.58	■□□□□ 0.56
ACACA-238	ENST00000616352	FN1	P02751	2386 aa	Known RBP	18.58	■□□□□ 0.56
ACACA-238	ENST00000616352		A0A1W2PPI3	338 aa		18.57	■□□□□ 0.56
ACACA-238	ENST00000616352		M0R1X1	148 aa		18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	GAPDH	P04406	335 aa	Known RBP	18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	PAX6	P26367	422 aa		18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	PHLDA2	Q53GA4	152 aa		18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	CMTM1	Q8IZ96	169 aa		18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	MRPL20	Q9BYC9	149 aa	Known RBP	18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	MS4A7	Q9GZW8	240 aa	Predicted RBP	18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	FLVCR2	Q9UPI3	526 aa		18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	TEP1	Q99973	2627 aa	Known RBP	18.57	■□□□□ 0.56
ACACA-238	ENST00000616352	TXNL1	O43396	289 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	TNFSF12	O43508	249 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	CT45A6	P0DMU7	189 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	CT45A5	P0DMU8	189 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	CT45A7	P0DMV0	189 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	DUT	P33316	252 aa	Known RBP	18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	LINC00205	P59089	165 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	RND3	P61587	244 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352		Q71RC1	249 aa	Predicted RBP	18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	BCL6B	Q8N143	479 aa	Predicted RBP	18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	DRAXIN	Q8NBI3	349 aa	Predicted RBP	18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	C20orf85	Q9H1P6	137 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	C14orf166	Q9Y224	244 aa	Known RBP	18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	IGHV1-3	A0A0C4DH29	117 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	PGLYRP1	O75594	196 aa	Predicted RBP	18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	PIGP	P57054	158 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	TUSC1	Q2TAM9	212 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	CCDC144NL	Q6NUI1	221 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	OR8H3	Q8N146	312 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	HSD17B10	Q99714	261 aa	Known RBP	18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	NABP2	Q9BQ15	211 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	NUDT15	Q9NV35	164 aa		18.56	■□□□□ 0.56
ACACA-238	ENST00000616352	LINC00473	A8K010	186 aa		18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	RPL30	P62888	115 aa	Known RBP	18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	RGS21	Q2M5E4	152 aa		18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	ABCA11P	Q4W5N1	156 aa		18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	ZNF66	Q6ZN08	573 aa		18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	ADAD2	Q8NCV1	583 aa	Known RBP	18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	C22orf15	Q8WYQ4	148 aa		18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	TMEM230	Q96A57	120 aa		18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	MEGF9	Q9H1U4	602 aa		18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	NUBP2	Q9Y5Y2	271 aa		18.55	■□□□□ 0.56
ACACA-238	ENST00000616352	ARPC1B	O15143	372 aa	Known RBP	18.54	■□□□□ 0.56
ACACA-238	ENST00000616352	SPN	P16150	400 aa		18.54	■□□□□ 0.56
ACACA-238	ENST00000616352	SRP14	P37108	136 aa	Known RBP	18.54	■□□□□ 0.56
ACACA-238	ENST00000616352	HABP2	Q14520	560 aa	Predicted RBP	18.54	■□□□□ 0.56
ACACA-238	ENST00000616352	ZNF383	Q8NA42	475 aa		18.54	■□□□□ 0.56
ACACA-238	ENST00000616352	DDB2	Q92466	427 aa		18.54	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms