RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	CLPS	P04118	112 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	MBD3L1	Q8WWY6	194 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	GAL3ST2	Q9H3Q3	398 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	TAAR3P	Q9P1P4	343 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	FAM166B	A8MTA8	275 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	DEFB108A	A8MXU0	73 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	OR7C2	O60412	319 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	CER1	O95813	267 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	PRDX4	Q13162	271 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	C9orf50	Q5SZB4	431 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	RFESD	Q8TAC1	157 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	GABRG3	Q99928	467 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	TOX4	O94842	621 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	IFI6	P09912	130 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	CLDN15	P56746	228 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	FBLN7	Q53RD9	439 aa		13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	TECR	Q9NZ01	308 aa	Known RBP	13.36	□□□□□ -0.27
SYNRG-223	ENST00000616179	ICE1	Q9Y2F5	2266 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	CXCL13	O43927	109 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	DUSP3	P51452	185 aa	Predicted RBP	13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	CATR1	Q13166	79 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179		Q6ZRM9	215 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	EFNA2	O43921	213 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	RIPPLY3	P57055	190 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	GAGE1	Q13065	139 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	RAB35	Q15286	201 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	PLPPR5	Q32ZL2	321 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	PSMG3	Q9BT73	122 aa	Predicted RBP	13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	HS3ST3A1	Q9Y663	406 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	EML5	Q05BV3	1969 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	TMEM11	P17152	192 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	RELB	Q01201	579 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	FGFRL1	Q8N441	504 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	PLPPR1	Q8TBJ4	325 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	NANOS1	Q8WY41	292 aa	Known RBP	13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	DNAJC13	O75165	2243 aa		13.35	□□□□□ -0.27
SYNRG-223	ENST00000616179	TRAV1-1	A0A0B4J248	108 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	PDE6D	O43924	150 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	ZG16	O60844	167 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	NXPH2	O95156	264 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	GRP	P07492	148 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	RAB31	Q13636	194 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	SIGLEC12	Q96PQ1	595 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	HIPK2	Q9H2X6	1198 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	CCL25	O15444	150 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	GNG4	P50150	75 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	PCBD1	P61457	104 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179		Q5PR19	223 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	HES3	Q5TGS1	186 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	KIAA0895L	Q68EN5	471 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	GCNT2	Q8N0V5	402 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	CPT1C	Q8TCG5	803 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	FOXB1	Q99853	325 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	QTRT1	Q9BXR0	403 aa	Known RBP	13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	TNFSF4	P23510	183 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	NMS	Q5H8A3	153 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	OR4A16	Q8NH70	328 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	ZDHHC16	Q969W1	377 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	GPR35	Q9HC97	309 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	IGHV3-43	A0A0B4J1X8	118 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	SCO2	A0A1W2PP80	73 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179		F2Z2F3	143 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	ZIC3	O60481	467 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	IGHV3-43D	P0DP04	118 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	PAX9	P55771	341 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	SUMO3	P55854	103 aa	Predicted RBP	13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	OR8B8	Q15620	311 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	PRAMEF5	Q5TYX0	476 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	PRAMEF6	Q5VXH4	476 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	S100A7A	Q86SG5	101 aa		13.34	□□□□□ -0.27
SYNRG-223	ENST00000616179	EN2	P19622	333 aa	Predicted RBP	13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	RABEPK	Q7Z6M1	372 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	CORO2A	Q92828	525 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	BCL2L2	Q92843	193 aa	Predicted RBP	13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	ABHD14B	Q96IU4	210 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	OR2D2	Q9H210	308 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	SCRG1	O75711	98 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	LINC01551	Q86U37	167 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	MMD2	Q8IY49	270 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	UNC80	Q8N2C7	3258 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	IGKV1D-33	P01593	117 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	IGKV1-33	P01594	117 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	NHLRC2	Q8NBF2	726 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	FSCN3	Q9NQT6	498 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	PXMP4	Q9Y6I8	212 aa		13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	NCOA6	Q14686	2063 aa	Predicted RBP	13.33	□□□□□ -0.28
SYNRG-223	ENST00000616179	KIR2DL5B	A0A0G2JN68	375 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	KIR2DL5B	A0A0G2JPC4	375 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	SYNGR1	O43759	233 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	MRPL33	O75394	65 aa	Known RBP	13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	CRYAB	P02511	175 aa	Known RBP	13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	ARL14EPL	P0DKL9	152 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	ZFP36L1	Q07352	338 aa	Known RBP	13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	GABRA6	Q16445	453 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	DOLPP1	Q86YN1	238 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179	KIR2DL5A	Q8N109	375 aa		13.32	□□□□□ -0.28
SYNRG-223	ENST00000616179		K7ERU9	68 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms