RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 PYHIN1Q6K0P9 492 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 UNQ5815/PRO19632Q6UWF5 114 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 CEACAM19Q7Z692 300 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 PPP1R27Q86WC6 154 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 MS4A10Q96PG2 267 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 C11orf54Q9H0W9 315 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 LPAR5Q9H1C0 372 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 GHITMQ9H3K2 345 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 METTL1Q9UBP6 276 aaKnown RBP16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 AK3Q9UIJ7 227 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 RNF150Q9ULK6 438 aa16.01■□□□□ 0.15
TRAPPC3-208ENST00000616074 TRIM64CA6NLI5 447 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 SOCS1O15524 211 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 PROP1O75360 226 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 BPNT1O95861 308 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 CA2P00918 260 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 OR8U9P0C7N5 309 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 CEACAM6P40199 344 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 OGFRL1Q5TC84 451 aaPredicted RBP16■□□□□ 0.15
TRAPPC3-208ENST00000616074 RNLSQ5VYX0 342 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 DRAXINQ8NBI3 349 aaPredicted RBP16■□□□□ 0.15
TRAPPC3-208ENST00000616074 LFNGQ8NES3 379 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 OR6M1Q8NGM8 313 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 OR6Q1Q8NGQ2 317 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 MUC7Q8TAX7 377 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 RNF5Q99942 180 aa16■□□□□ 0.15
TRAPPC3-208ENST00000616074 RIMS4Q9H426 269 aaPredicted RBP16■□□□□ 0.15
TRAPPC3-208ENST00000616074 LSM2Q9Y333 95 aaKnown RBP16■□□□□ 0.15
TRAPPC3-208ENST00000616074 STARD9Q9P2P6 4700 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 HSPB1P04792 205 aaKnown RBP15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 UCHL1P09936 223 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 ZBTB25P24278 435 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 TPPP2P59282 170 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 PITPNAQ00169 270 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 PSG5Q15238 335 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 AKIRIN2Q53H80 203 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 CASC10Q5T4H9 136 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 EDARADDQ8WWZ3 215 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 GFI1Q99684 422 aa15.99■□□□□ 0.15
TRAPPC3-208ENST00000616074 HSPA12AO43301 675 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 IGKV1-16P04430 117 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 SCTP09683 121 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 LINC00205P59089 165 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 P2RY14Q15391 338 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 SPHARQ15513 63 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 ZNF562Q6V9R5 426 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 FLYWCH2Q96CP2 140 aaKnown RBP15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 RHOVQ96L33 236 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 URM1Q9BTM9 101 aaKnown RBP15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 LYSTQ99698 3801 aa15.98■□□□□ 0.15
TRAPPC3-208ENST00000616074 FOXI3A8MTJ6 420 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 PTGES3LE9PB15 166 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 CASQ2O14958 399 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 CPEP16870 476 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 MED22Q15528 200 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 SRSF7Q16629 238 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 HAPLN4Q86UW8 402 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 FAM89BQ8N5H3 189 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 ZNF383Q8NA42 475 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 PTX4Q96A99 478 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 SLA2Q9H6Q3 261 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 Q9N2K0 584 aa15.97■□□□□ 0.15
TRAPPC3-208ENST00000616074 CSMD3Q7Z407 3707 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 IGKV1-6A0A0C4DH72 117 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 SPDEFO95238 335 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 TFAP2AP05549 437 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 ARSBP15848 533 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 TMEM50BP56557 158 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 LIPKQ5VXJ0 399 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 TMEM203Q969S6 136 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 OR4C12Q96R67 309 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 TSNAXQ99598 290 aaKnown RBP15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 PLGRKTQ9HBL7 147 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 C12orf4Q9NQ89 552 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 HSF4Q9ULV5 492 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 MGAT4AQ9UM21 535 aa15.96■□□□□ 0.15
TRAPPC3-208ENST00000616074 SLC17A2O00624 439 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 ARPC1BO15143 372 aaKnown RBP15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 TRGV3P03979 118 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 CD40LGP29965 261 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 RPS16P62249 146 aaKnown RBP15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 PDPNQ86YL7 162 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 GRPEL2Q8TAA5 225 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 UFD1Q92890 307 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 ARHGAP5-AS1Q96IT6 56 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 ZMAT4Q9H898 229 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 ZNF221Q9UK13 617 aa15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 AK6Q9Y3D8 172 aaKnown RBP15.95■□□□□ 0.14
TRAPPC3-208ENST00000616074 TENM2Q9NT68 2774 aa15.94■□□□□ 0.14
TRAPPC3-208ENST00000616074 SLC25A17O43808 307 aa15.94■□□□□ 0.14
TRAPPC3-208ENST00000616074 VEGFCP49767 419 aa15.94■□□□□ 0.14
TRAPPC3-208ENST00000616074 IRF3Q14653 427 aa15.94■□□□□ 0.14
TRAPPC3-208ENST00000616074 FXYD3Q14802 87 aa15.94■□□□□ 0.14
TRAPPC3-208ENST00000616074 TMEM91Q6ZNR0 172 aa15.94■□□□□ 0.14
TRAPPC3-208ENST00000616074 CMSS1Q9BQ75 279 aaKnown RBP15.94■□□□□ 0.14
TRAPPC3-208ENST00000616074 PECRQ9BY49 303 aa15.94■□□□□ 0.14
TRAPPC3-208ENST00000616074 APOA2P02652 100 aa15.93■□□□□ 0.14
TRAPPC3-208ENST00000616074 CLDN12P56749 244 aa15.93■□□□□ 0.14
TRAPPC3-208ENST00000616074 RPS25P62851 125 aaKnown RBP15.93■□□□□ 0.14
TRAPPC3-208ENST00000616074 SSBP2P81877 361 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms