RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 SOD3P08294 240 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 DDTP30046 118 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 RPL29P47914 159 aaKnown RBP10.67□□□□□ -0.7
MSH6-213ENST00000614496 SCCPDHQ8NBX0 429 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 PARLQ9H300 379 aa10.67□□□□□ -0.7
MSH6-213ENST00000614496 TRAV38-1A0A0B4J264 116 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 FOXI3A8MTJ6 420 aaPredicted RBP10.66□□□□□ -0.7
MSH6-213ENST00000614496 TAAR6Q96RI8 345 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 LILRA1O75019 489 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 RNF224P0DH78 156 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 HERPUD1Q15011 391 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 ZNF525Q8N782 197 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 OR2Z1Q8NG97 314 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 CA5BP1Q8WTZ4 195 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 OR5P3Q8WZ94 311 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 ZDHHC16Q969W1 377 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 WDR61Q9GZS3 305 aaKnown RBP10.66□□□□□ -0.7
MSH6-213ENST00000614496 ZNF729A6NN14 1252 aaPredicted RBP10.66□□□□□ -0.7
MSH6-213ENST00000614496 WNT9BO14905 357 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 S1PR2O95136 353 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 MPLP40238 635 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 NMSQ5H8A3 153 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 TOMM20LQ6UXN7 152 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 C20orf204Q6ZNR8 217 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 TMEM178AQ8NBL3 297 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 MS4A10Q96PG2 267 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 RPH3ALQ9UNE2 315 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 ARHGAP21Q5T5U3 1957 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 TRAV24A0A0B4J272 114 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 NDUFB4O95168 129 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 Q6ZRM9 215 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 R3HDM4Q96D70 268 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 S1PR3Q99500 378 aa10.66□□□□□ -0.7
MSH6-213ENST00000614496 CADP27708 2225 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 OR7C2O60412 319 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 HBZP02008 142 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 TMEM42Q69YG0 159 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 OR1P1Q8NH06 330 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 PLPPR1Q8TBJ4 325 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 SSC4DQ8WTU2 575 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 GATAD1Q8WUU5 269 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 SDF2L1Q9HCN8 221 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 CRIM1Q9NZV1 1036 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 K7ESF4 209 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 THBS3P49746 956 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 FBXW9Q5XUX1 488 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 PROK2Q9HC23 129 aa10.65□□□□□ -0.7
MSH6-213ENST00000614496 FOSL1P15407 271 aa10.65□□□□□ -0.71
MSH6-213ENST00000614496 DCAF10Q5QP82 559 aa10.65□□□□□ -0.71
MSH6-213ENST00000614496 LRRC29Q8WV35 223 aa10.65□□□□□ -0.71
MSH6-213ENST00000614496 CHD9Q3L8U1 2897 aa10.65□□□□□ -0.71
MSH6-213ENST00000614496 A0A087WWC5 75 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 IGKV1-6A0A0C4DH72 117 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 COL10A1Q03692 680 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 ATP6V1FQ16864 119 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 SMIM21Q3B7S5 101 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 SAXO1Q8IYX7 474 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 OR8G5Q8NG78 346 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 TFF3Q07654 80 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 LRRC75BQ2VPJ9 315 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 ZNF718Q3SXZ3 478 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 ABLIM2Q6H8Q1 611 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 ELOVL1Q9BW60 279 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 DNAH14Q0VDD8 3507 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 NAPSAO96009 420 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 IGLV3-1P01715 115 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 CYC1P08574 325 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 NTF3P20783 257 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 ERVFC1-1P60608 527 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 C21orf62-AS1Q17RA5 79 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 IQCJQ1A5X6 159 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 OR4X1Q8NH49 305 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 SGMS2Q8NHU3 365 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 MANBALQ9NQG1 85 aa10.64□□□□□ -0.71
MSH6-213ENST00000614496 KIAA1324LA8MWY0 1029 aaPredicted RBP10.63□□□□□ -0.71
MSH6-213ENST00000614496 HOXA6P31267 233 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 KRTDAPP60985 99 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 ARL16Q0P5N6 197 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 ZNF766Q5HY98 468 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 TIPARPQ7Z3E1 657 aaKnown RBP10.63□□□□□ -0.71
MSH6-213ENST00000614496 EDARADDQ8WWZ3 215 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 EML6Q6ZMW3 1958 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 CELA3BP08861 270 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 CDPF1Q6NVV7 123 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 ZNF600Q6ZNG1 722 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 FOXL2NBQ6ZUU3 175 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 VKORC1L1Q8N0U8 176 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 RAMP3O60896 148 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 KBTBD11O94819 623 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 HRASP01112 189 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 SSTR5P35346 364 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 B3GALT5-AS1P59052 145 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 ATP1A1-AS1Q5TC04 95 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 ZNF324BQ6AW86 544 aaPredicted RBP10.63□□□□□ -0.71
MSH6-213ENST00000614496 LINC00596Q86U02 117 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 LSM10Q969L4 123 aaKnown RBP10.63□□□□□ -0.71
MSH6-213ENST00000614496 P2RX4Q99571 388 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 TMEM131Q92545 1883 aa10.63□□□□□ -0.71
MSH6-213ENST00000614496 ODAMA1E959 279 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms