RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 RAB29O14966 203 aa16.52■□□□□ 0.24
CPNE9-205ENST00000613455 ANXA3P12429 323 aa16.52■□□□□ 0.24
CPNE9-205ENST00000613455 RPL30P62888 115 aaKnown RBP16.52■□□□□ 0.24
CPNE9-205ENST00000613455 C1orf122Q6ZSJ8 110 aa16.52■□□□□ 0.24
CPNE9-205ENST00000613455 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.52■□□□□ 0.24
CPNE9-205ENST00000613455 COQ8AQ8NI60 647 aa16.52■□□□□ 0.24
CPNE9-205ENST00000613455 METTL8Q9H825 291 aaKnown RBP16.52■□□□□ 0.24
CPNE9-205ENST00000613455 MGAT4CQ9UBM8 478 aa16.52■□□□□ 0.24
CPNE9-205ENST00000613455 KPTNQ9Y664 436 aa16.52■□□□□ 0.24
CPNE9-205ENST00000613455 PRSS57Q6UWY2 283 aa16.51■□□□□ 0.23
CPNE9-205ENST00000613455 LHFPL5Q8TAF8 219 aa16.51■□□□□ 0.23
CPNE9-205ENST00000613455 ST6GAL2Q96JF0 529 aa16.51■□□□□ 0.23
CPNE9-205ENST00000613455 TMEM222Q9H0R3 208 aa16.51■□□□□ 0.23
CPNE9-205ENST00000613455 SIRT7Q9NRC8 400 aa16.51■□□□□ 0.23
CPNE9-205ENST00000613455 PIPOXQ9P0Z9 390 aa16.51■□□□□ 0.23
CPNE9-205ENST00000613455 GOSR2O14653 212 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 CCNKO75909 580 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 PRTN3P24158 256 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 UCP1P25874 307 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 LINC00205P59089 165 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 CD83Q01151 205 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 ZNF66Q6ZN08 573 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 LIAT1Q6ZQX7 453 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 CLEC7AQ9BXN2 247 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 SIRPDQ9H106 197 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 UNKLQ9H9P5 680 aaKnown RBP16.5■□□□□ 0.23
CPNE9-205ENST00000613455 LIN7CQ9NUP9 197 aaKnown RBP16.5■□□□□ 0.23
CPNE9-205ENST00000613455 LINC00473A8K010 186 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 M0R1X1 148 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 IGLV1-47P01700 117 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 MMP9P14780 707 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 DUTP33316 252 aaKnown RBP16.5■□□□□ 0.23
CPNE9-205ENST00000613455 HCP5Q6MZN7 132 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 LRTM2Q8N967 370 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 TNFRSF14Q92956 283 aa16.5■□□□□ 0.23
CPNE9-205ENST00000613455 HSD17B10Q99714 261 aaKnown RBP16.5■□□□□ 0.23
CPNE9-205ENST00000613455 RANGRFQ9HD47 186 aaPredicted RBP16.5■□□□□ 0.23
CPNE9-205ENST00000613455 RNF212BA8MTL3 300 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 SIX6O95475 246 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 COX7A1P24310 79 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 DVL1P1P54792 670 aaPredicted RBP16.49■□□□□ 0.23
CPNE9-205ENST00000613455 H2BFSP57053 126 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 BRWD1-AS2P59051 145 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 DCAF12L2Q5VW00 463 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 VMO1Q7Z5L0 202 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 DRAXINQ8NBI3 349 aaPredicted RBP16.49■□□□□ 0.23
CPNE9-205ENST00000613455 OR5M8Q8NGP6 311 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 OR10X1Q8NGY0 326 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 INSIG2Q9Y5U4 225 aa16.49■□□□□ 0.23
CPNE9-205ENST00000613455 CCSO14618 274 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 B3GALNT1O75752 331 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 ZNF16P17020 682 aaPredicted RBP16.48■□□□□ 0.23
CPNE9-205ENST00000613455 ZNF137PP52743 207 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 ZNF833PQ6ZTB9 187 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 PNKDQ8N490 385 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 TCTEX1D2Q8WW35 142 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 C1orf159Q96HA4 380 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 TMEM56Q96MV1 263 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 FYTTD1Q96QD9 318 aaKnown RBP16.48■□□□□ 0.23
CPNE9-205ENST00000613455 TMEM56-RWDD3S4R434 201 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 PRRC2AP48634 2157 aaKnown RBP16.48■□□□□ 0.23
CPNE9-205ENST00000613455 CR1P17927 2039 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 ADAP1O75689 374 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 CDS2O95674 445 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 HLA-GP17693 338 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 LOXL1Q08397 574 aaPredicted RBP16.48■□□□□ 0.23
CPNE9-205ENST00000613455 CATR1Q13166 79 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 KLRD1Q13241 179 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 HLA-DRB5Q30154 266 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 ZNF585BQ52M93 769 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 LGI3Q8N145 548 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 BEND2Q8NDZ0 799 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 OR13D1Q8NGV5 346 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 ST6GALNAC6Q969X2 333 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 C18orf12Q96KH6 178 aa16.48■□□□□ 0.23
CPNE9-205ENST00000613455 ZNF436Q9C0F3 470 aaPredicted RBP16.48■□□□□ 0.23
CPNE9-205ENST00000613455 RNF223E7ERA6 249 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 TOR1AO14656 332 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 RAMP3O60896 148 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 SRPXP78539 464 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 OR2B11Q5JQS5 317 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 NCR3LG1Q68D85 454 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 OR11H6Q8NGC7 330 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 OR4P4Q8NGL7 312 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 Q96MF0 132 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 S1PR3Q99500 378 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 REG4Q9BYZ8 158 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 RAB18Q9NP72 206 aa16.47■□□□□ 0.23
CPNE9-205ENST00000613455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.46■□□□□ 0.23
CPNE9-205ENST00000613455 MSMBP08118 114 aa16.46■□□□□ 0.23
CPNE9-205ENST00000613455 HOXB4P17483 251 aaPredicted RBP16.46■□□□□ 0.23
CPNE9-205ENST00000613455 PRRX1P54821 245 aa16.46■□□□□ 0.23
CPNE9-205ENST00000613455 PAX8Q06710 450 aa16.46■□□□□ 0.23
CPNE9-205ENST00000613455 TMEM268Q5VZI3 342 aa16.46■□□□□ 0.23
CPNE9-205ENST00000613455 FAM71F2Q6NXP2 309 aa16.46■□□□□ 0.23
CPNE9-205ENST00000613455 SELENOHQ8IZQ5 122 aaKnown RBP16.46■□□□□ 0.23
CPNE9-205ENST00000613455 DDB2Q92466 427 aa16.46■□□□□ 0.23
CPNE9-205ENST00000613455 WDR89Q96FK6 387 aaPredicted RBP16.46■□□□□ 0.23
CPNE9-205ENST00000613455 TBX15Q96SF7 602 aa16.46■□□□□ 0.23
CPNE9-205ENST00000613455 CCDC168Q8NDH2 2452 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms