RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ABHD5Q8WTS1 349 aa13.73□□□□□ -0.21
SSBP1-215ENST00000612337 CASTOR1Q8WTX7 329 aa13.73□□□□□ -0.21
SSBP1-215ENST00000612337 EDARADDQ8WWZ3 215 aa13.73□□□□□ -0.21
SSBP1-215ENST00000612337 LPAR5Q9H1C0 372 aa13.73□□□□□ -0.21
SSBP1-215ENST00000612337 SCN3BQ9NY72 215 aa13.73□□□□□ -0.21
SSBP1-215ENST00000612337 RNF150Q9ULK6 438 aa13.73□□□□□ -0.21
SSBP1-215ENST00000612337 MGAT4AQ9UM21 535 aa13.73□□□□□ -0.21
SSBP1-215ENST00000612337 IGHV4OR15-8A0A075B7B6 117 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 A0A087WW49 117 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 ZBTB25P24278 435 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 CEACAM6P40199 344 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 HLA-DRB3P79483 266 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 AKIRIN2Q53H80 203 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 ACTBL2Q562R1 376 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 PPP1R27Q86WC6 154 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 FAM89BQ8N5H3 189 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 HDHD3Q9BSH5 251 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-215ENST00000612337 URM1Q9BTM9 101 aaKnown RBP13.72□□□□□ -0.21
SSBP1-215ENST00000612337 C11orf54Q9H0W9 315 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-215ENST00000612337 OR1A1Q9P1Q5 309 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 AK3Q9UIJ7 227 aa13.72□□□□□ -0.21
SSBP1-215ENST00000612337 SOCS1O15524 211 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 HSPA12AO43301 675 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 SPNP16150 400 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 MED22Q15528 200 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 ACSM6Q6P461 480 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 ZNF562Q6V9R5 426 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 SBSPONQ8IVN8 264 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 OR6Q1Q8NGQ2 317 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 PTX4Q96A99 478 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 FAM103A1Q9BTL3 118 aaKnown RBP13.71□□□□□ -0.21
SSBP1-215ENST00000612337 METTL1Q9UBP6 276 aaKnown RBP13.71□□□□□ -0.21
SSBP1-215ENST00000612337 HSF4Q9ULV5 492 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 GAB2Q9UQC2 676 aa13.71□□□□□ -0.21
SSBP1-215ENST00000612337 LYSTQ99698 3801 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 FOXI3A8MTJ6 420 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-215ENST00000612337 PROP1O75360 226 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 SPDEFO95238 335 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 HSPB1P04792 205 aaKnown RBP13.7□□□□□ -0.22
SSBP1-215ENST00000612337 OR8U9P0C7N5 309 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 GP9P14770 177 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 ARSBP15848 533 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 IRF3Q14653 427 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 PSG5Q15238 335 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 LIPKQ5VXJ0 399 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 UNQ5815/PRO19632Q6UWF5 114 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 LFNGQ8NES3 379 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 ARPC1AQ92747 370 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 UFD1Q92890 307 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 FLYWCH2Q96CP2 140 aaKnown RBP13.7□□□□□ -0.22
SSBP1-215ENST00000612337 CLCC1Q96S66 551 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 TSNAXQ99598 290 aaKnown RBP13.7□□□□□ -0.22
SSBP1-215ENST00000612337 GFI1Q99684 422 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 DUSP21Q9H596 190 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 SLA2Q9H6Q3 261 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 Q9N2K0 584 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 TPRKBQ9Y3C4 175 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 STARD9Q9P2P6 4700 aa13.7□□□□□ -0.22
SSBP1-215ENST00000612337 SLC17A2O00624 439 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 ARPC1BO15143 372 aaKnown RBP13.69□□□□□ -0.22
SSBP1-215ENST00000612337 CA2P00918 260 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 IGHV3-11P01762 117 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 SCTP09683 121 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 CPEP16870 476 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 CD40LGP29965 261 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 TMEM50BP56557 158 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 TPPP2P59282 170 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 P2RY14Q15391 338 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 DRAXINQ8NBI3 349 aaPredicted RBP13.69□□□□□ -0.22
SSBP1-215ENST00000612337 TMEM203Q969S6 136 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 RHOVQ96L33 236 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 MS4A10Q96PG2 267 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 RCHY1Q96PM5 261 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 VCX3BQ9H321 246 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 PLGRKTQ9HBL7 147 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 C12orf4Q9NQ89 552 aa13.69□□□□□ -0.22
SSBP1-215ENST00000612337 IGKV1-16P04430 117 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 TFAP2AP05549 437 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 SNRPBP14678 240 aaKnown RBP13.68□□□□□ -0.22
SSBP1-215ENST00000612337 PITPNAQ00169 270 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 TMEM91Q6ZNR0 172 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 OVCH2Q7RTZ1 564 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 PDPNQ86YL7 162 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 ARHGAP5-AS1Q96IT6 56 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 ZNF221Q9UK13 617 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 AK6Q9Y3D8 172 aaKnown RBP13.68□□□□□ -0.22
SSBP1-215ENST00000612337 CSMD3Q7Z407 3707 aa13.68□□□□□ -0.22
SSBP1-215ENST00000612337 IGKV1-6A0A0C4DH72 117 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 ERICH4A6NGS2 130 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 APOA2P02652 100 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 FRMD6-AS1P0C7T7 363 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 VEGFCP49767 419 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 LINC00205P59089 165 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 RPS16P62249 146 aaKnown RBP13.67□□□□□ -0.22
SSBP1-215ENST00000612337 TPBGQ13641 420 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 TRAM1Q15629 374 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 RAB11BQ15907 218 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 ZNF383Q8NA42 475 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
SSBP1-215ENST00000612337 OR4C12Q96R67 309 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms