RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SUCNR1Q9BXA5 334 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 EBPLQ9BY08 206 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 OR51E2Q9H255 320 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 FAM96AQ9H5X1 160 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 DOK5Q9P104 306 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 OPTCQ9UBM4 332 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 PYCARDQ9ULZ3 195 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 C14orf166Q9Y224 244 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 WRNQ14191 1432 aaPredicted RBP eCLIP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 PTPRKQ15262 1439 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 FAM135BQ49AJ0 1406 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 SMG6Q86US8 1419 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 RB1CC1Q8TDY2 1594 aa2.4□□□□□ -2.02
SMCHD1-213ENST00000609587 CACNA1SQ13698 1873 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 A0A096LPI6 279 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 IGHV3OR16-9A0A0B4J2B5 98 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 MYBPHLA2RUH7 354 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 OR5H14A6NHG9 310 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF850A8MQ14 1090 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 C8orf87E5RJ46 101 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 J3QT63 122 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 MANBAO00462 879 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC17A3O00476 420 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 UPK1BO75841 260 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 PDYNP01213 254 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 HLA-DQB1P01920 261 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 REG1AP05451 166 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC35G6P0C7Q6 338 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 CDK2P24941 298 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 SERPINB10P48595 397 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 GNG2P59768 71 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 RPS28P62857 69 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 CACNG7P62955 275 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 ELF3P78545 371 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 EMX2Q04743 252 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 PRDX1Q06830 199 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 RNASE13Q5GAN3 156 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 HAGHLQ6PII5 290 aaPredicted RBP2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC25A34Q6PIV7 304 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF550Q7Z398 422 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 CALHM3Q86XJ0 350 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF567Q8N184 647 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 OR4D11Q8NGI4 311 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 OR9Q1Q8NGQ5 310 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 OR2K2Q8NGT1 345 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 OR52P1PQ8NH57 321 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 OR10D3Q8NH80 312 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 RXFP2Q8WXD0 754 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC25A46Q96AG3 418 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 FAAP24Q9BTP7 215 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 EMC6Q9BV81 110 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 SAMD10Q9BYL1 202 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 ENY2Q9NPA8 101 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 EXOSC4Q9NPD3 245 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 C8orf17Q9NRJ1 99 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 UTP11Q9Y3A2 253 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 OVOS2A0A0J9YW53 1432 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 BCL9O00512 1426 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 OVOS2Q6IE36 1432 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 VWA8A3KMH1 1905 aa2.4□□□□□ -2.03
SMCHD1-213ENST00000609587 IGLV3-12A0A075B6K2 115 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 TRAV8-4A0A0B4J246 113 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 TEX50A0A1B0GTY4 177 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 MAP1LC3B2A6NCE7 125 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 C5orf58C9J3I9 102 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 D6RAR5 112 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 RPL36A-HNRNPH2H7BZ11 118 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 PFDN1O60925 122 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 PDCD6O75340 191 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 P01737 135 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 IGHMP01871 453 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 MPC1LP0DKB6 136 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 CXCL2P19875 107 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 MYL9P24844 172 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 CD34P28906 385 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 PRSS3P35030 304 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 RCVRNP35243 200 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 MAP2K4P45985 399 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 NDUFA8P51970 172 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 CKS1BP61024 79 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 SAMD13Q5VXD3 122 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC35F6Q8N357 371 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF439Q8NDP4 499 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 OR1S1Q8NH92 325 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 MCFD2Q8NI22 146 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 BLNKQ8WV28 456 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 TMEM203Q969S6 136 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 BORCS7Q96B45 105 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 GALMQ96C23 342 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 DIRAS2Q96HU8 199 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 RDH12Q96NR8 316 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 OR52E6Q96RD3 313 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 TCEAL7Q9BRU2 100 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 TMEM243Q9BU79 118 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 C1orf50Q9BV19 199 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 MROQ9BYG7 248 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 MAP1LC3BQ9GZQ8 125 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 CCDC90BQ9GZT6 254 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms