RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 CEACAM6P40199 344 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 RPS27AP62979 156 aaKnown RBP11.44□□□□□ -0.58
CTSA-216ENST00000607212 PSG5Q15238 335 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 ACSM3Q53FZ2 586 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 CD200R1LQ6Q8B3 271 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 BPIFB6Q8NFQ5 453 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 KCNG3Q8TAE7 436 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 NRG4Q8WWG1 115 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 CITED4Q96RK1 184 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 NICN1Q9BSH3 213 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 TMED9Q9BVK6 235 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 PARP12Q9H0J9 701 aaKnown RBP11.44□□□□□ -0.58
CTSA-216ENST00000607212 ARPC1BO15143 372 aaKnown RBP11.43□□□□□ -0.58
CTSA-216ENST00000607212 TFAP2AP05549 437 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 ZP3P21754 424 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 ZBTB25P24278 435 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 HTR2CP28335 458 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 CRIP2P52943 208 aaPredicted RBP11.43□□□□□ -0.58
CTSA-216ENST00000607212 INSL4Q14641 139 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 FXYD3Q14802 87 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 AKIRIN2Q53H80 203 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 C19orf54Q5BKX5 351 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 LYPD6Q86Y78 171 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 C8orf59Q8N0T1 100 aaPredicted RBP11.43□□□□□ -0.58
CTSA-216ENST00000607212 ZNF485Q8NCK3 441 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 OR5T1Q8NG75 326 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 RHOVQ96L33 236 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 RIMS4Q9H426 269 aaPredicted RBP11.43□□□□□ -0.58
CTSA-216ENST00000607212 TUBA4BQ9H853 241 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 RANGRFQ9HD47 186 aaPredicted RBP11.43□□□□□ -0.58
CTSA-216ENST00000607212 TPSG1Q9NRR2 321 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 OR1A1Q9P1Q5 309 aa11.43□□□□□ -0.58
CTSA-216ENST00000607212 LCE6AA0A183 80 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 SLC25A17O43808 307 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 EGR2P11161 476 aaPredicted RBP11.42□□□□□ -0.58
CTSA-216ENST00000607212 HLA-DRB3P79483 266 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 HSD17B12Q53GQ0 312 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 ZNF562Q6V9R5 426 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 RNF5Q99942 180 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 HDHD3Q9BSH5 251 aaPredicted RBP11.42□□□□□ -0.58
CTSA-216ENST00000607212 URM1Q9BTM9 101 aaKnown RBP11.42□□□□□ -0.58
CTSA-216ENST00000607212 C11orf54Q9H0W9 315 aaPredicted RBP11.42□□□□□ -0.58
CTSA-216ENST00000607212 PLGRKTQ9HBL7 147 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 AK3Q9UIJ7 227 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 STAB2Q8WWQ8 2551 aa11.42□□□□□ -0.58
CTSA-216ENST00000607212 A0A0G2JLM5 398 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 M0R1X1 148 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 SPDEFO95238 335 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 IFNA6P05013 189 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 CD1AP06126 327 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 CBX3Q13185 183 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 P2RY14Q15391 338 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 CEACAM19Q7Z692 300 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 GTSCR1Q86UQ5 136 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 MS4A15Q8N5U1 240 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 POC5Q8NA72 575 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 OR5AN1Q8NGI8 311 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 PHB2Q99623 299 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 SPATA25Q9BR10 227 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 TM2D3Q9BRN9 247 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 TM2D1Q9BX74 207 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 SLC35D1Q9NTN3 355 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 COA4Q9NYJ1 87 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 MGAT4AQ9UM21 535 aa11.41□□□□□ -0.58
CTSA-216ENST00000607212 HUWE1Q7Z6Z7 4374 aaKnown RBP11.41□□□□□ -0.58
CTSA-216ENST00000607212 H0Y980 276 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 ITGB1BP1O14713 200 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 BPNT1O95861 308 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 NAPSAO96009 420 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 IGLV1-51P01701 117 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 MRPS15P82914 257 aaKnown RBP11.4□□□□□ -0.58
CTSA-216ENST00000607212 UNC119Q13432 240 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 TATDN3Q17R31 274 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 ZNF880Q6PDB4 577 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 ADAMTSL5Q6ZMM2 481 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 LRRTM1Q86UE6 522 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 PDPNQ86YL7 162 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 NANOGP1Q8N7R0 232 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 PHYHIPQ92561 330 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 MND1Q9BWT6 205 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 C8orf4Q9NR00 106 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 PSORS1C1Q9UIG5 152 aa11.4□□□□□ -0.58
CTSA-216ENST00000607212 MPPED1O15442 326 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 SOCS1O15524 211 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 SCTP09683 121 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 SNRPBP14678 240 aaKnown RBP11.39□□□□□ -0.59
CTSA-216ENST00000607212 SRMP19623 302 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 LGALS7P47929 136 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 SYNJ2BPP57105 145 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 LINC00205P59089 165 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 DEFA5Q01523 94 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 C1orf100Q5SVJ3 147 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 PACRGLQ8N7B6 248 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 OR6M1Q8NGM8 313 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 CMSS1Q9BQ75 279 aaKnown RBP11.39□□□□□ -0.59
CTSA-216ENST00000607212 C12orf4Q9NQ89 552 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 RBM7Q9Y580 266 aaKnown RBP11.39□□□□□ -0.59
CTSA-216ENST00000607212 TENM2Q9NT68 2774 aa11.39□□□□□ -0.59
CTSA-216ENST00000607212 DNAH7Q8WXX0 4024 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms