RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 ZNF833PQ6ZTB9 187 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 MOB1BQ7L9L4 216 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 GPR141Q7Z602 305 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 LHFPL3Q86UP9 236 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 PPP1R27Q86WC6 154 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 OR10V1Q8NGI7 309 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 GHSRQ92847 366 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 TSC22D3Q99576 134 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 NABP2Q9BQ15 211 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 PDCD1LG2Q9BQ51 273 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 BCL7BQ9BQE9 202 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 RBM38Q9H0Z9 239 aaKnown RBP4.84□□□□□ -1.63
CUX1-220ENST00000607092 RIMS4Q9H426 269 aaPredicted RBP4.84□□□□□ -1.63
CUX1-220ENST00000607092 TPSG1Q9NRR2 321 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 MBNL3Q9NUK0 354 aaKnown RBP4.84□□□□□ -1.63
CUX1-220ENST00000607092 SLC2A8Q9NY64 477 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 TAS2R4Q9NYW5 299 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 CNOT2Q9NZN8 540 aaKnown RBP4.84□□□□□ -1.63
CUX1-220ENST00000607092 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 WASHC3Q9Y3C0 194 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 NUBP2Q9Y5Y2 271 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 CEPT1Q9Y6K0 416 aa4.84□□□□□ -1.63
CUX1-220ENST00000607092 IGHV4OR15-8A0A075B7B6 117 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 A0A087WW49 117 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 SHISA3A0PJX4 238 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 H7C2Y5 167 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 SLC31A2O15432 143 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 PDCD6O75340 191 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 TPPPO94811 219 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 OR2A4O95047 310 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 APOA2P02652 100 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 TRGV3P03979 118 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 MAS1P04201 325 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 RCC1P18754 421 aaPredicted RBP4.83□□□□□ -1.64
CUX1-220ENST00000607092 MAPK3P27361 379 aaPredicted RBP4.83□□□□□ -1.64
CUX1-220ENST00000607092 DCKP27707 260 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 LGALS7P47929 136 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 SOX2P48431 317 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 ZNF134P52741 427 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 TMBIM6P55061 237 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 TAS2R43P59537 309 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 CBX3Q13185 183 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 CNPY1Q3B7I2 92 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 Q499Y3 187 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 YIF1BQ5BJH7 314 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 C19orf54Q5BKX5 351 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 GLT8D1Q68CQ7 371 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 UNQ5815/PRO19632Q6UWF5 114 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 PRSS48Q7RTY5 328 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 SPARTQ8N0X7 666 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 Q8N1Y9 231 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 SVOPQ8N4V2 548 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 JAGN1Q8N5M9 183 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 NKAIN3Q8N8D7 197 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 POC5Q8NA72 575 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 OR9G4Q8NGQ1 327 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 OR4K15Q8NH41 348 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 OR1L1Q8NH94 360 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 FCGR1BQ92637 280 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 SMIM19Q96E16 107 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 USMG5Q96IX5 58 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 NEDD4LQ96PU5 975 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 SULT4A1Q9BR01 284 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 UQCC2Q9BRT2 126 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 TMED9Q9BVK6 235 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 MRPL20Q9BYC9 149 aaKnown RBP4.83□□□□□ -1.64
CUX1-220ENST00000607092 MRPS18AQ9NVS2 196 aaKnown RBP4.83□□□□□ -1.64
CUX1-220ENST00000607092 PTTG2Q9NZH5 202 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 RSL24D1Q9UHA3 163 aaKnown RBP4.83□□□□□ -1.64
CUX1-220ENST00000607092 SLC23A1Q9UHI7 598 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 A3GALT2U3KPV4 340 aa4.83□□□□□ -1.64
CUX1-220ENST00000607092 SAA2-SAA4A0A096LPE2 208 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 EFCAB10A6NFE3 127 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 PTGES3LE9PB15 166 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 RGS10O43665 173 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 SOX15O60248 233 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 WBP4O75554 376 aaKnown RBP4.82□□□□□ -1.64
CUX1-220ENST00000607092 CRTAPO75718 401 aaPredicted RBP4.82□□□□□ -1.64
CUX1-220ENST00000607092 CNIH1O95406 144 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 IGHV3-11P01762 117 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 SAA2P0DJI9 122 aaPredicted RBP4.82□□□□□ -1.64
CUX1-220ENST00000607092 MGMTP16455 207 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 CPEP16870 476 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 GABRB1P18505 474 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 MYL12AP19105 171 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 FSTP19883 344 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 PPP1CCP36873 323 aaKnown RBP4.82□□□□□ -1.64
CUX1-220ENST00000607092 KLF5Q13887 457 aaPredicted RBP4.82□□□□□ -1.64
CUX1-220ENST00000607092 RNLSQ5VYX0 342 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 AWAT2Q6E213 333 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 LAIR2Q6ISS4 152 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 GLIPR1L1Q6UWM5 242 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 FAM131AQ6UXB0 335 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 ADAMTSL5Q6ZMM2 481 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 LINC00299Q6ZSB3 139 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 LFNGQ8NES3 379 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 BPIFB6Q8NFQ5 453 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 OR5AN1Q8NGI8 311 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 OR13F1Q8NGS4 319 aa4.82□□□□□ -1.64
CUX1-220ENST00000607092 UBALD1Q8TB05 177 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms