RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CCR6P51684 374 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 LINC00205P59089 165 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 BPIFB3P59826 476 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 IDO2Q6ZQW0 420 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 ZNF818PQ6ZRF7 136 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 TGIF2LXQ8IUE1 241 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 DRAM1Q8N682 238 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 ZNF645Q8N7E2 425 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 DRAXINQ8NBI3 349 aaPredicted RBP6.2□□□□□ -1.42
MSH6-211ENST00000606499 OR13C8Q8NGS7 320 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 MARCH1Q8TCQ1 289 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 RPEQ96AT9 228 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 MALSU1Q96EH3 234 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 MRPL20Q9BYC9 149 aaKnown RBP6.2□□□□□ -1.42
MSH6-211ENST00000606499 CCL28Q9NRJ3 127 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 SDHAF2Q9NX18 166 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 SLC2A8Q9NY64 477 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 PIPOXQ9P0Z9 390 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 ZNF221Q9UK13 617 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 FAM96BQ9Y3D0 163 aa6.2□□□□□ -1.42
MSH6-211ENST00000606499 IGHV3-72A0A0B4J1Y9 119 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 M0R1X1 148 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 TIMM23O14925 209 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 LYRM1O43325 122 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 TNFSF12O43508 249 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 GAPDHP04406 335 aaKnown RBP6.19□□□□□ -1.42
MSH6-211ENST00000606499 PGAM2P15259 253 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 PI3P19957 117 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 CD24P25063 80 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 GNRHRP30968 328 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 RAB13P51153 203 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 ZNF816Q0VGE8 651 aaPredicted RBP6.19□□□□□ -1.42
MSH6-211ENST00000606499 ASAH1Q13510 395 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 PHLDA2Q53GA4 152 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 FBLN7Q53RD9 439 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 C16orf87Q6PH81 154 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 GLDNQ6ZMI3 551 aaPredicted RBP6.19□□□□□ -1.42
MSH6-211ENST00000606499 SIGLECL1Q8N7X8 197 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.19□□□□□ -1.42
MSH6-211ENST00000606499 TERB2Q8NHR7 220 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 FAM216AQ8WUB2 273 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 DEDD2Q8WXF8 326 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 CFHR4Q92496 578 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 BORCS5Q969J3 196 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 S1PR3Q99500 378 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 PRRT1Q99946 306 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 NABP2Q9BQ15 211 aa6.19□□□□□ -1.42
MSH6-211ENST00000606499 TENM1Q9UKZ4 2725 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 NAP1L6A6NFF2 107 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 LINC00473A8K010 186 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 CENPXA8MT69 81 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 OOSP1A8MZH6 123 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 H3BUX3 64 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 TXNL1O43396 289 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 IGHV4-59P01825 116 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 RLN1P04808 185 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 FAM157CP0CG43 387 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 CT45A6P0DMU7 189 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 CT45A5P0DMU8 189 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 CT45A7P0DMV0 189 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 UCP3P55916 312 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 RPL30P62888 115 aaKnown RBP6.18□□□□□ -1.42
MSH6-211ENST00000606499 EIF4EBP1Q13541 118 aaPredicted RBP6.18□□□□□ -1.42
MSH6-211ENST00000606499 TUSC1Q2TAM9 212 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 LRRC75BQ2VPJ9 315 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 OR2B11Q5JQS5 317 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 CCDC144NLQ6NUI1 221 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 FAM71F2Q6NXP2 309 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 KCTD9Q7L273 389 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 MOB3BQ86TA1 216 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 SLC38A6Q8IZM9 456 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 OR8H3Q8N146 312 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 DUX5Q96PT3 197 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 C7orf50Q9BRJ6 194 aaKnown RBP6.18□□□□□ -1.42
MSH6-211ENST00000606499 RSRP1Q9BUV0 290 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 MEGF9Q9H1U4 602 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 GHITMQ9H3K2 345 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 TNFRSF19Q9NS68 423 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 SCP2D1Q9UJQ7 156 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 VSIG4Q9Y279 399 aa6.18□□□□□ -1.42
MSH6-211ENST00000606499 NAV3Q8IVL0 2385 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 FBN1P35555 2871 aaKnown RBP6.17□□□□□ -1.42
MSH6-211ENST00000606499 DNAJC9-AS1A6NH13 148 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 VGLL3A8MV65 326 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 H0YJW9 148 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 GPR31O00270 319 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 HOXA3O43365 443 aaPredicted RBP6.17□□□□□ -1.42
MSH6-211ENST00000606499 SLC22A5O76082 557 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 VENTXO95231 258 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 SNRNP70P08621 437 aaKnown RBP6.17□□□□□ -1.42
MSH6-211ENST00000606499 DUTP33316 252 aaKnown RBP6.17□□□□□ -1.42
MSH6-211ENST00000606499 IER3P46695 156 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 THBS3P49746 956 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 ARHGDIBP52566 201 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 SCGB2A2Q13296 93 aa6.17□□□□□ -1.42
MSH6-211ENST00000606499 HABP2Q14520 560 aaPredicted RBP6.17□□□□□ -1.42
MSH6-211ENST00000606499 RBMS2Q15434 407 aaKnown RBP6.17□□□□□ -1.42
MSH6-211ENST00000606499 MSMO1Q15800 293 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms