RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 C5orf30Q96GV9 206 aa10.1□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 SEC22AQ96IW7 307 aa10.1□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 CCL19Q99731 98 aa10.1□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 PLEKHA2Q9HB19 425 aa10.1□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 PRR13Q9NZ81 148 aa10.1□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 PRELID3BQ9Y3B1 194 aa10.1□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 SESN1Q9Y6P5 492 aa10.1□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 MYO18BQ8IUG5 2567 aa10.1□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 FXYD6-FXYD2A0A087WZ82 144 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 FAM90A26D6RGX4 464 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 M0R1W7 72 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 TNFSF12O43508 249 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 LIPFP07098 398 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 IGHV1-8P0DP01 117 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 S100A11P31949 105 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 CDKN1AP38936 164 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 PDLIM4P50479 330 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 ZNF134P52741 427 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 ZNF585BQ52M93 769 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 PRAMEF5Q5TYX0 476 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 DHRS7BQ6IAN0 325 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 ACOT7LQ6ZUV0 252 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 DDB2Q92466 427 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 S1PR3Q99500 378 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 SSBP3Q9BWW4 388 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 MMP24Q9Y5R2 645 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 POMT1Q9Y6A1 747 aa10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 SMG1Q96Q15 3661 aaKnown RBP10.09□□□□□ -0.79
NEDD8-MDP1-203ENST00000604306 MPTX1A8MV57 137 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 ARPC5O15511 151 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 ST8SIA3O43173 380 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 PITX3O75364 302 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 DEDDO75618 318 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 LY86O95711 162 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 HPRT1P00492 218 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 P0C879 139 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 RRASP10301 218 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 OMGP23515 440 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 NFYBP25208 207 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 NUP62P37198 522 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 GNB2P62879 340 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 RAB32Q13637 225 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 AVPI1Q5T686 147 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 ZNF833PQ6ZTB9 187 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 ZNF767PQ75MW2 155 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 ODF3L1Q8IXM7 274 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 FGFRL1Q8N441 504 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 KCNRGQ8N5I3 272 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 INO80EQ8NBZ0 244 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 OR9G1Q8NH87 305 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 GRPEL2Q8TAA5 225 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 TCTEX1D2Q8WW35 142 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 TMEM186Q96B77 213 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 RRNAD1Q96FB5 475 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 ZNF251Q9BRH9 671 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 MFFQ9GZY8 342 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 MBD2Q9UBB5 411 aa10.08□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 SAA2-SAA4A0A096LPE2 208 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 PPIAL4CA0A0B4J2A2 164 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 E5RGE8 158 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 J3QR06 171 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 PROP1O75360 226 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 IGKV1-39P01597 117 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 IGHV2-5P01817 119 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 IGKV1D-39P04432 117 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 SAA2P0DJI9 122 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 PPIAL4GP0DN37 164 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 CCL3L1P16619 93 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 CXCL2P19875 107 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 IL3RAP26951 378 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 NKX2-1P43699 371 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 DSCR9P59020 149 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 ERVFRD-1P60508 538 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 RPL30P62888 115 aaKnown RBP10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 LTC4SQ16873 150 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 SPAG16Q8N0X2 631 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 FAM71E2Q8N5Q1 922 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 C11orf42Q8N5U0 333 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 BEND2Q8NDZ0 799 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 OR4S2Q8NH73 311 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 AIFM2Q9BRQ8 373 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 RNF126Q9BV68 326 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 UNKLQ9H9P5 680 aaKnown RBP10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 RNF150Q9ULK6 438 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 POLR3KQ9Y2Y1 108 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 FLNCQ14315 2725 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 RNF222A6NCQ9 220 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 LINC00473A8K010 186 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 K7EPK0 472 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 M0R1X1 148 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 SLC31A2O15432 143 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 TXNL1O43396 289 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 MMP23AO75900 390 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 IGHV4-39P01824 125 aa10.06□□□□□ -0.8
NEDD8-MDP1-203ENST00000604306 MBPP02686 304 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms