RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 IGKV1D-33P01593 117 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 IGKV1-33P01594 117 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 CT45A6P0DMU7 189 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 CT45A5P0DMU8 189 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 CT45A7P0DMV0 189 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 NFYAP23511 347 aaPredicted RBP11.1□□□□□ -0.63
RNF40-212ENST00000602784 MC5RP33032 325 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 S100A5P33763 92 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 LUMP51884 338 aaPredicted RBP11.1□□□□□ -0.63
RNF40-212ENST00000602784 ACTBP60709 375 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 LSAMPQ13449 338 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 RPL39P5Q59GN2 51 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 DHRS11Q6UWP2 260 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 Q8N6K4 173 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 OR2T10Q8NGZ9 312 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 OR52I2Q8NH67 350 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 GIMAP1Q8WWP7 306 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 EAF1Q96JC9 268 aaPredicted RBP11.1□□□□□ -0.63
RNF40-212ENST00000602784 SLC25A33Q9BSK2 321 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 MRPL20Q9BYC9 149 aaKnown RBP11.1□□□□□ -0.63
RNF40-212ENST00000602784 OR2D2Q9H210 308 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 C16orf95Q9H693 158 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 ZNF107Q9UII5 783 aaPredicted RBP11.1□□□□□ -0.63
RNF40-212ENST00000602784 RBM7Q9Y580 266 aaKnown RBP11.1□□□□□ -0.63
RNF40-212ENST00000602784 STAB1Q9NY15 2570 aa11.1□□□□□ -0.63
RNF40-212ENST00000602784 FABP12A6NFH5 140 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 OR5H14A6NHG9 310 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 TMEM11P17152 192 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 TBPP20226 339 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 FCGR2CP31995 323 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 RFX2P48378 723 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 RAG2P55895 527 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 DYRK1AQ13627 763 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 IL18Q14116 193 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 HES1Q14469 280 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 Q8N2B8 174 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 OR8H1Q8NGG4 311 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 OR5AN1Q8NGI8 311 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 OR4C13Q8NGP0 309 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 OR5H2Q8NGV7 314 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 SMIM4Q8WVI0 70 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 SDHAF2Q9NX18 166 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
RNF40-212ENST00000602784 IGHV3-72A0A0B4J1Y9 119 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
RNF40-212ENST00000602784 FCER2P06734 321 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 PTBP1P26599 531 aaKnown RBP eCLIP11.08□□□□□ -0.64
RNF40-212ENST00000602784 TAGLNQ01995 201 aaKnown RBP11.08□□□□□ -0.64
RNF40-212ENST00000602784 MSMO1Q15800 293 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 FBLN7Q53RD9 439 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 ACTBL2Q562R1 376 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 ZNF660Q6AZW8 331 aaPredicted RBP11.08□□□□□ -0.64
RNF40-212ENST00000602784 Q6ZSV7 163 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 ZNF645Q8N7E2 425 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 SPATA3Q8NHX4 192 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 ADTRPQ96IZ2 230 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 BATF3Q9NR55 127 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 EHFQ9NZC4 300 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 KLK11Q9UBX7 282 aa11.08□□□□□ -0.64
RNF40-212ENST00000602784 IGKV1D-13A0A0B4J2D9 117 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 CLPSL1A2RUU4 121 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 H0YJW9 148 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 M0R1X1 148 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 FGF16O43320 207 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 GSTZ1O43708 216 aaPredicted RBP11.07□□□□□ -0.64
RNF40-212ENST00000602784 PPYP01298 95 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 PMP2P02689 132 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 AMY1AP04745 511 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 AMY2AP04746 511 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 IGKV1-13P0DP09 117 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 AADACP22760 399 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 HLA-DMAP28067 261 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 HRH1P35367 487 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 ETV6P41212 452 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 DGCR2P98153 550 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 HNF4GQ14541 408 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 AWAT1Q58HT5 328 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 VAX1Q5SQQ9 334 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 C11orf88Q6PI97 169 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 CCDC190Q86UF4 302 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 OR6F1Q8NGZ6 308 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 LINC01006Q8NI28 216 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 RNF5Q99942 180 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 PRSS22Q9GZN4 317 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 PLSCR3Q9NRY6 295 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 RBMX2Q9Y388 322 aaKnown RBP11.07□□□□□ -0.64
RNF40-212ENST00000602784 MOB4Q9Y3A3 225 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 WASHC3Q9Y3C0 194 aa11.07□□□□□ -0.64
RNF40-212ENST00000602784 IGLV2-14P01704 120 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 BLCAPP62952 87 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 FAM131AQ6UXB0 335 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 ZNF383Q8NA42 475 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 TMEM229BQ8NBD8 167 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 DRAXINQ8NBI3 349 aaPredicted RBP11.06□□□□□ -0.64
RNF40-212ENST00000602784 ZBTB34Q8NCN2 500 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 OR6Q1Q8NGQ2 317 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 OR2T6Q8NHC8 308 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 TAF15Q92804 592 aaKnown RBP eCLIP11.06□□□□□ -0.64
RNF40-212ENST00000602784 BORCS5Q969J3 196 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms