RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ABHD12Q8N2K0 398 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 OR9G1Q8NH87 305 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 TCTEX1D2Q8WW35 142 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 RBPMSQ93062 196 aaKnown RBP14.74□□□□□ -0.05
VRK3-225ENST00000601912 SEC22AQ96IW7 307 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 S1PR3Q99500 378 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 BEX4Q9NWD9 120 aaPredicted RBP14.74□□□□□ -0.05
VRK3-225ENST00000601912 TMED3Q9Y3Q3 217 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 DUXBA0A1W2PPF3 345 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 A8MXK9 166 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 VWC2LB2RUY7 222 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 J3QR06 171 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 M0R1W7 72 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 FOXH1O75593 365 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 DNASE1P24855 282 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 RPL39P5Q59GN2 51 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 GGNBP1Q5YKI7 109 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 LYZL2Q7Z4W2 148 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 SELENOHQ8IZQ5 122 aaKnown RBP14.73□□□□□ -0.05
VRK3-225ENST00000601912 LINC00311Q8N616 119 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 OR10X1Q8NGY0 326 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 LHFPL5Q8TAF8 219 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 FAM212BQ9NTI7 297 aaPredicted RBP14.73□□□□□ -0.05
VRK3-225ENST00000601912 COMMD9Q9P000 198 aa14.73□□□□□ -0.05
VRK3-225ENST00000601912 SAA2-SAA4A0A096LPE2 208 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 KIAA1324LA8MWY0 1029 aaPredicted RBP14.72□□□□□ -0.05
VRK3-225ENST00000601912 TOR1AO14656 332 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 SAA2P0DJI9 122 aaPredicted RBP14.72□□□□□ -0.05
VRK3-225ENST00000601912 RPA2P15927 270 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 ZFP36P26651 326 aaKnown RBP14.72□□□□□ -0.05
VRK3-225ENST00000601912 DUTP33316 252 aaKnown RBP14.72□□□□□ -0.05
VRK3-225ENST00000601912 SLC35G3Q8N808 338 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 ZNF596Q8TC21 504 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 CD300LFQ8TDQ1 290 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 TNFRSF14Q92956 283 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 C2orf50Q96LR7 162 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 HYLS1Q96M11 299 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 NMES1Q9C002 83 aa14.72□□□□□ -0.05
VRK3-225ENST00000601912 PROP1O75360 226 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 PRRX1P54821 245 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 ARF6P62330 175 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 RPL30P62888 115 aaKnown RBP14.71□□□□□ -0.05
VRK3-225ENST00000601912 LCN2P80188 198 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 FGL1Q08830 312 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 ODF3L1Q8IXM7 274 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 KIR3DL3Q8N743 410 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 ADTRPQ96IZ2 230 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 PRELID3BQ9Y3B1 194 aa14.71□□□□□ -0.05
VRK3-225ENST00000601912 IGHV4-30-2A0A087WSY4 118 aa14.71□□□□□ -0.06
VRK3-225ENST00000601912 VDAC1P21796 283 aa14.71□□□□□ -0.06
VRK3-225ENST00000601912 GZMKP49863 264 aa14.71□□□□□ -0.06
VRK3-225ENST00000601912 CLEC12BQ2HXU8 276 aa14.71□□□□□ -0.06
VRK3-225ENST00000601912 IAH1Q2TAA2 248 aaPredicted RBP14.71□□□□□ -0.06
VRK3-225ENST00000601912 C1orf122Q6ZSJ8 110 aa14.71□□□□□ -0.06
VRK3-225ENST00000601912 SPAG16Q8N0X2 631 aa14.71□□□□□ -0.06
VRK3-225ENST00000601912 WDR89Q96FK6 387 aaPredicted RBP14.71□□□□□ -0.06
VRK3-225ENST00000601912 OR10C1Q96KK4 312 aa14.71□□□□□ -0.06
VRK3-225ENST00000601912 CLEC7AQ9BXN2 247 aa14.71□□□□□ -0.06
VRK3-225ENST00000601912 TACC2O95359 2948 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 IGHV2-26A0A0B4J1V2 119 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 IGHV4-61A0A0C4DH41 118 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 LINC00473A8K010 186 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 MPTX1A8MV57 137 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 ATG12O94817 140 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 SLC25A16P16260 332 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 IL3RAP26951 378 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 KIR2DS2P43631 304 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 LPAR6P43657 344 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 THBS3P49746 956 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 DEFB113Q30KQ7 82 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 ZNF585BQ52M93 769 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 LRRC75A-AS1Q8N1F1 130 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 DRAXINQ8NBI3 349 aaPredicted RBP14.7□□□□□ -0.06
VRK3-225ENST00000601912 OR13D1Q8NGV5 346 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 TMEM186Q96B77 213 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 ZNF251Q9BRH9 671 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 GSKIPQ9P0R6 139 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 KPTNQ9Y664 436 aa14.7□□□□□ -0.06
VRK3-225ENST00000601912 IGHV2-70DA0A0C4DH43 119 aa14.69□□□□□ -0.06
VRK3-225ENST00000601912 NKX2-5P52952 324 aaPredicted RBP14.69□□□□□ -0.06
VRK3-225ENST00000601912 OR2B11Q5JQS5 317 aa14.69□□□□□ -0.06
VRK3-225ENST00000601912 NCR3LG1Q68D85 454 aa14.69□□□□□ -0.06
VRK3-225ENST00000601912 RNASE11Q8TAA1 199 aaKnown RBP14.69□□□□□ -0.06
VRK3-225ENST00000601912 PPP1R1CQ8WVI7 109 aa14.69□□□□□ -0.06
VRK3-225ENST00000601912 SPIN2AQ99865 258 aa14.69□□□□□ -0.06
VRK3-225ENST00000601912 SPIN2BQ9BPZ2 258 aa14.69□□□□□ -0.06
VRK3-225ENST00000601912 PTPN13Q12923 2485 aa14.69□□□□□ -0.06
VRK3-225ENST00000601912 PRTN3P24158 256 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 Q5BKY6 102 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 FAM71F2Q6NXP2 309 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 ZNF833PQ6ZTB9 187 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 Q8N7P7 452 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 BEND2Q8NDZ0 799 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 HEXA-AS1Q9H8Q6 139 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 ZNRD1Q9P1U0 126 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 RAMP3O60896 148 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 FCGR3BO75015 233 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 AKR1C2P52895 323 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 LINC00205P59089 165 aa14.68□□□□□ -0.06
VRK3-225ENST00000601912 PAX2Q02962 417 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 618.6 ms