RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PGLYRP1O75594 196 aaPredicted RBP9.75□□□□□ -0.85
VRK3-223ENST00000601341 ZNF205O95201 554 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 OR8U9P0C7N5 309 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 FOLR2P14207 255 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 CD80P33681 288 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 CAMLGP49069 296 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 HOXA4Q00056 320 aaPredicted RBP9.75□□□□□ -0.85
VRK3-223ENST00000601341 MIDNQ504T8 468 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 C11orf71Q6IPW1 123 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 OR8U1Q8NH10 309 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 RDH5Q92781 318 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 C19orf12Q9NSK7 152 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 WIPI2Q9Y4P8 454 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 LRRK2Q5S007 2527 aa9.75□□□□□ -0.85
VRK3-223ENST00000601341 IGHV1-69-2A0A0G2JMI3 117 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 SIRPB1O00241 398 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 SLC33A1O00400 549 aaPredicted RBP9.74□□□□□ -0.85
VRK3-223ENST00000601341 HSPB6O14558 160 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 SIGLEC5O15389 551 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 CYB5R3P00387 301 aaPredicted RBP9.74□□□□□ -0.85
VRK3-223ENST00000601341 PSG2P11465 335 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 PRDX2P32119 198 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 NPBWR1P48145 328 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 VAMP2P63027 116 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 NHLH2Q02577 135 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 TMEM252Q8N6L7 170 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 C15orf54Q8N8G6 183 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 CCL17Q92583 94 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 RAB40CQ96S21 281 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 UNKLQ9H9P5 680 aaKnown RBP9.74□□□□□ -0.85
VRK3-223ENST00000601341 MLXQ9UH92 298 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 LAMP3Q9UQV4 416 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 FAM96BQ9Y3D0 163 aa9.74□□□□□ -0.85
VRK3-223ENST00000601341 IGKV1D-13A0A0B4J2D9 117 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 DFFBO76075 338 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 CLDN1O95832 211 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 IGKV1-13P0DP09 117 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 TLE4Q04727 773 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 MSMO1Q15800 293 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 GUK1Q16774 197 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 TGIF2LYQ8IUE0 185 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 TMEM231Q9H6L2 316 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 MBNL3Q9NUK0 354 aaKnown RBP9.73□□□□□ -0.85
VRK3-223ENST00000601341 TMEM106BQ9NUM4 274 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 CACNA1DQ01668 2161 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 IGKV1D-17A0A075B6S4 117 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 OOEPA6NGQ2 149 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 TMEM178BH3BS89 294 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 ADAM20O43506 726 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 PRH1P02810 166 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 COX6B1P14854 86 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 CEBPDP49716 269 aaPredicted RBP9.73□□□□□ -0.85
VRK3-223ENST00000601341 POLR2GP62487 172 aaKnown RBP eCLIP9.73□□□□□ -0.85
VRK3-223ENST00000601341 RHEBQ15382 184 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 RNF212Q495C1 297 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 FAM201AQ5SY85 155 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 TEX36Q5VZQ5 186 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 SP5Q6BEB4 398 aaPredicted RBP9.73□□□□□ -0.85
VRK3-223ENST00000601341 TMEM88Q6PEY1 159 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 ZNF497Q6ZNH5 498 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 CD177Q8N6Q3 437 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 NEU4Q8WWR8 484 aaPredicted RBP9.73□□□□□ -0.85
VRK3-223ENST00000601341 BSCL2Q96G97 398 aaPredicted RBP9.73□□□□□ -0.85
VRK3-223ENST00000601341 SLC35B3Q9H1N7 401 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 CCL28Q9NRJ3 127 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 WSB1Q9Y6I7 421 aa9.73□□□□□ -0.85
VRK3-223ENST00000601341 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 IGHV3OR15-7A0A075B7D8 119 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 TRAV38-1A0A0B4J264 116 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 A1L4Q6 167 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 PSPNO60542 156 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 SERPINE2P07093 398 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 GABRA2P47869 451 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 TAS2R30P59541 319 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 COL10A1Q03692 680 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 ZNF616Q08AN1 781 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 AVPI1Q5T686 147 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 ZBTB34Q8NCN2 500 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 DEFB108BQ8NET1 73 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 OR10V1Q8NGI7 309 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 PPP1R35Q8TAP8 253 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 PLPPR1Q8TBJ4 325 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 DCAF16Q9NXF7 216 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 ARFGEF3Q5TH69 2177 aa9.72□□□□□ -0.85
VRK3-223ENST00000601341 CHD3Q12873 2000 aaKnown RBP9.71□□□□□ -0.85
VRK3-223ENST00000601341 IGSF23A1L1A6 192 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 RNF212BA8MTL3 300 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 FAM90A26D6RGX4 464 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 WRBO00258 174 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 HOXA1P49639 335 aaPredicted RBP9.71□□□□□ -0.85
VRK3-223ENST00000601341 RAB13P51153 203 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 RPL23AP62750 156 aaKnown RBP9.71□□□□□ -0.85
VRK3-223ENST00000601341 MRPS11P82912 194 aaKnown RBP9.71□□□□□ -0.85
VRK3-223ENST00000601341 STUMQ69YW2 141 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 C20orf204Q6ZNR8 217 aa9.71□□□□□ -0.85
VRK3-223ENST00000601341 STX12Q86Y82 276 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms