RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SELLP14151 372 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 Q6ZR03 302 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 PIP4P1Q86T03 277 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 WDR31Q8NA23 367 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 OR8G5Q8NG78 346 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 SCGB1C1Q8TD33 95 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 TMEM56Q96MV1 263 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 TMEM56-RWDD3S4R434 201 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 KALRNO60229 2985 aa9.71□□□□□ -0.85
ARHGEF1-220ENST00000600274 TMEM30CPA0ZSE6 113 aa9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 PHOX2AO14813 284 aa9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 DANCRP0C864 163 aa9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 RNF212Q495C1 297 aa9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 MOGAT3Q86VF5 341 aa9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNRF1Q8ND25 227 aa9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 SPOCK3Q9BQ16 436 aa9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 ARFGEF3Q5TH69 2177 aa9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 COL27A1Q8IZC6 1860 aaPredicted RBP9.71□□□□□ -0.86
ARHGEF1-220ENST00000600274 SMIM6P0DI80 62 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 RAB5CP51148 216 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 NMSQ5H8A3 153 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF497Q6ZNH5 498 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 SNIP1Q8TAD8 396 aaKnown RBP9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 GPR61Q9BZJ8 451 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 SLC35B3Q9H1N7 401 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 LYRM2Q9NU23 88 aaPredicted RBP9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 IGHV2OR16-5A0A0B4J2B6 119 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 IGHV1-18A0A0C4DH31 117 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 SEC11BP0C7V7 166 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 FAM27E3Q08E93 113 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 SPRNQ5BIV9 151 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 Q8IYB0 196 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZCCHC24Q8N2G6 241 aaKnown RBP9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 Q8NFD4 153 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 OR13A1Q8NGR1 328 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 CLN8Q9UBY8 286 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 UBE2L5PA0A1B0GUS4 154 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF891A8MT65 544 aaPredicted RBP9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 NUDT19A8MXV4 375 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 PPP1R2P9O14990 202 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 IGKV1-39P01597 117 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 IGKV1D-39P04432 117 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 GFI1BQ5VTD9 330 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 OR5D13Q8NGL4 314 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 STARD4Q96DR4 205 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 MUCL1Q96DR8 90 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 CXXC4Q9H2H0 198 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 GAR1Q9NY12 217 aaKnown RBP9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 PTPRQQ9UMZ3 2332 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 ABCA1O95477 2261 aa9.7□□□□□ -0.86
ARHGEF1-220ENST00000600274 SYNGR2O43760 224 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 IGKV1-5P01602 117 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 CRYAAP02489 173 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 MMP9P14780 707 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 SNCAP37840 140 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF124Q15973 351 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 WDR82Q6UXN9 313 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 VKORC1L1Q8N0U8 176 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 HINT2Q9BX68 163 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 SMCO3A2RU48 225 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 IQCF6A8MYZ5 107 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 RPL30P62888 115 aaKnown RBP9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 LIN7CQ9NUP9 197 aaKnown RBP9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 WASF3Q9UPY6 502 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 TGIF2-C20orf24A0A0A6YYL0 155 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 CLEC18AA5D8T8 446 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 CEBPZOSA8MTT3 80 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 S1PR2O95136 353 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 TRGC2P03986 189 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 CD55P08174 381 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF429Q86V71 674 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 CLEC18CQ8NCF0 446 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 OR2V2Q96R30 315 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 GINS3Q9BRX5 216 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 NIPSNAP3BQ9BS92 247 aa9.69□□□□□ -0.86
ARHGEF1-220ENST00000600274 C5orf52A6NGY3 159 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 H3BQ15 152 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 AQP7O14520 342 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 IGHG3P01860 377 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 DEFA4P12838 97 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 EGR1P18146 543 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 CD82P27701 267 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 SMIM21Q3B7S5 101 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 CISD2Q8N5K1 135 aaKnown RBP9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 CYB561D1Q8N8Q1 229 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 RBM14Q96PK6 669 aaKnown RBP9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 TMPRSS5Q9H3S3 457 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 GFOD1Q9NXC2 390 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 DOK5Q9P104 306 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 C17orf98A8MV24 154 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 OR8U8P0C7N1 319 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 ID3Q02535 119 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 MSMPQ1L6U9 139 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 ZNF880Q6PDB4 577 aa9.68□□□□□ -0.86
ARHGEF1-220ENST00000600274 ACP7Q6ZNF0 438 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms