RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 OR5T1Q8NG75 326 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 IL17DQ8TAD2 202 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 PYDC1Q8WXC3 89 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 GALMQ96C23 342 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 SMIM19Q96E16 107 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 ABHD14BQ96IU4 210 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 Q96MT0 163 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 CLCC1Q96S66 551 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 S100A13Q99584 98 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 FAM110AQ9BQ89 295 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 FAAP24Q9BTP7 215 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 SELENOIQ9C0D9 397 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 KCNIP1Q9NZI2 227 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 PIPOXQ9P0Z9 390 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 METTL1Q9UBP6 276 aaKnown RBP4.62□□□□□ -1.67
VRK3-220ENST00000600259 SLC23A1Q9UHI7 598 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 CLEC2DQ9UHP7 191 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 RNF150Q9ULK6 438 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 RPL36Q9Y3U8 105 aaKnown RBP4.62□□□□□ -1.67
VRK3-220ENST00000600259 DMRT1Q9Y5R6 373 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 LOC100130705A0A1B0GUX0 176 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 A0A1W2PPK0 400 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 SHISA3A0PJX4 238 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 ANKRD34BA5PLL1 514 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 OR5H14A6NHG9 310 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 H3BUA1 57 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 IGLV2-23P01705 113 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 GSTP1P09211 210 aaKnown RBP4.61□□□□□ -1.67
VRK3-220ENST00000600259 CD7P09564 240 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 DCKP27707 260 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 HTR2CP28335 458 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 QRFPP83859 136 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 DYRK1AQ13627 763 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 FXYD3Q14802 87 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 MOGAT2Q3SYC2 334 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 OR10K2Q6IF99 312 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 Q8N402 240 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 SVOPQ8N4V2 548 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 ZFP41Q8N8Y5 198 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 ZNF383Q8NA42 475 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 DRAXINQ8NBI3 349 aaPredicted RBP4.61□□□□□ -1.67
VRK3-220ENST00000600259 OR2AK2Q8NG84 335 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 LINC00476Q8WZB0 136 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 PTX4Q96A99 478 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 DERL3Q96Q80 235 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 RSRP1Q9BUV0 290 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 TMED9Q9BVK6 235 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 TINAGL1Q9GZM7 467 aaPredicted RBP4.61□□□□□ -1.67
VRK3-220ENST00000600259 C11orf54Q9H0W9 315 aaPredicted RBP4.61□□□□□ -1.67
VRK3-220ENST00000600259 TUBA4BQ9H853 241 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 PGPEP1Q9NXJ5 209 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 PEF1Q9UBV8 284 aaKnown RBP4.61□□□□□ -1.67
VRK3-220ENST00000600259 WASHC3Q9Y3C0 194 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 CEPT1Q9Y6K0 416 aa4.61□□□□□ -1.67
VRK3-220ENST00000600259 A0A0A6YYD4 124 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 TRBV6-6A0A0A6YYG2 114 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 IGKV1-6A0A0C4DH72 117 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 A0A0G2JLM5 398 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 C13orf42A0A1B0GVH6 325 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 SRRM4A7MD48 611 aaKnown RBP4.6□□□□□ -1.67
VRK3-220ENST00000600259 SLC22A1O15245 554 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 CRTAPO75718 401 aaPredicted RBP4.6□□□□□ -1.67
VRK3-220ENST00000600259 SPDEFO95238 335 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 CD40LGP29965 261 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 DEFA5Q01523 94 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 EWSR1Q01844 656 aaKnown RBP eCLIP4.6□□□□□ -1.67
VRK3-220ENST00000600259 PLGLAQ15195 96 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 DEFB114Q30KQ6 69 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 YIF1BQ5BJH7 314 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 C1orf100Q5SVJ3 147 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 RNLSQ5VYX0 342 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 AWAT2Q6E213 333 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 LCN12Q6JVE5 192 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 TMPRSS11AQ6ZMR5 421 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 C6orf201Q7Z4U5 140 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 JAGN1Q8N5M9 183 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 DEFB125Q8N687 156 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 OR2K2Q8NGT1 345 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 ABHD5Q8WTS1 349 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 FAM46BQ96A09 425 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 TSNAXQ99598 290 aaKnown RBP4.6□□□□□ -1.67
VRK3-220ENST00000600259 NEURL2Q9BR09 285 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 OVOL2Q9BRP0 275 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 UQCC2Q9BRT2 126 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 TM2D1Q9BX74 207 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 WFDC10AQ9H1F0 79 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 PLEKHA3Q9HB20 300 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 OR1A1Q9P1Q5 309 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 GHRLQ9UBU3 117 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 DIMT1Q9UNQ2 313 aaKnown RBP4.6□□□□□ -1.67
VRK3-220ENST00000600259 ORC6Q9Y5N6 252 aa4.6□□□□□ -1.67
VRK3-220ENST00000600259 TRBV9A0A0B4J1U6 114 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 FOXI3A8MTJ6 420 aaPredicted RBP4.59□□□□□ -1.67
VRK3-220ENST00000600259 TMEM14DPA8MWL7 114 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 H7C2Y5 167 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 BMPR1BO00238 502 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 SLC25A17O43808 307 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 OR2A4O95047 310 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 CD1AP06126 327 aa4.59□□□□□ -1.67
VRK3-220ENST00000600259 SCTP09683 121 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms