RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 BLCAPP62952 87 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 DGCR2P98153 550 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 EIF4EBP1Q13541 118 aaPredicted RBP10.96□□□□□ -0.65
VRK3-219ENST00000600137 DYRK1AQ13627 763 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 CDK10Q15131 360 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 CCDC190Q86UF4 302 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 GINS4Q9BRT9 223 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 C16orf95Q9H693 158 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 PITPNC1Q9UKF7 332 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 RBMX2Q9Y388 322 aaKnown RBP10.96□□□□□ -0.65
VRK3-219ENST00000600137 V9GYH0 126 aa10.96□□□□□ -0.65
VRK3-219ENST00000600137 GABARAPH6UMI1 98 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 J3QRK9 145 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 OR2F2O95006 317 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 PMP2P02689 132 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 FAM106CPP0CH98 169 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 AADACP22760 399 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 HLA-DMAP28067 261 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 FCGR2CP31995 323 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 HNF4GQ14541 408 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 PYHIN1Q6K0P9 492 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
VRK3-219ENST00000600137 Q8N2B8 174 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 ZNF383Q8NA42 475 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 DRAXINQ8NBI3 349 aaPredicted RBP10.95□□□□□ -0.66
VRK3-219ENST00000600137 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.95□□□□□ -0.66
VRK3-219ENST00000600137 OR5AN1Q8NGI8 311 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 OR6Q1Q8NGQ2 317 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 LINC01006Q8NI28 216 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 S1PR3Q99500 378 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 OR2D2Q9H210 308 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 ZNF702PQ9H963 129 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 IFT46Q9NQC8 304 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 NECAP2Q9NVZ3 263 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 ZNF221Q9UK13 617 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 MMP24Q9Y5R2 645 aa10.95□□□□□ -0.66
VRK3-219ENST00000600137 FABP12A6NFH5 140 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 H0YJW9 148 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 MDKP21741 143 aaPredicted RBP10.94□□□□□ -0.66
VRK3-219ENST00000600137 RCVRNP35243 200 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 HRH1P35367 487 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 ETV6P41212 452 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 GPR12P47775 334 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 LUMP51884 338 aaPredicted RBP10.94□□□□□ -0.66
VRK3-219ENST00000600137 ARHGDIBP52566 201 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 F2RL1P55085 397 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 RAG2P55895 527 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 ARPC4P59998 168 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 ZNF79Q15937 498 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 RNASE12Q5GAN4 147 aaKnown RBP10.94□□□□□ -0.66
VRK3-219ENST00000600137 DHRS7BQ6IAN0 325 aaPredicted RBP10.94□□□□□ -0.66
VRK3-219ENST00000600137 C11orf88Q6PI97 169 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 C16orf82Q7Z2V1 217 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 C15orf40Q8WUR7 153 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 SMIM4Q8WVI0 70 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 DDB2Q92466 427 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 SLC25A33Q9BSK2 321 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 RAB18Q9NP72 206 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 RABL2AQ9UBK7 228 aaPredicted RBP10.94□□□□□ -0.66
VRK3-219ENST00000600137 RABL2BQ9UNT1 228 aa10.94□□□□□ -0.66
VRK3-219ENST00000600137 LINC00473A8K010 186 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 GSTZ1O43708 216 aaPredicted RBP10.93□□□□□ -0.66
VRK3-219ENST00000600137 RBBP9O75884 186 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 MOSP00540 346 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 PPYP01298 95 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 DUTP33316 252 aaKnown RBP10.93□□□□□ -0.66
VRK3-219ENST00000600137 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 ACTG1P63261 375 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 MRPS10P82664 201 aaKnown RBP10.93□□□□□ -0.66
VRK3-219ENST00000600137 FOXL1Q12952 345 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 IL18Q14116 193 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 AWAT1Q58HT5 328 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 FCAMRQ8WWV6 532 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 RANBP3Q9H6Z4 567 aaPredicted RBP10.93□□□□□ -0.66
VRK3-219ENST00000600137 EHFQ9NZC4 300 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 SIGLEC9Q9Y336 463 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 PLXNB1O43157 2135 aa10.93□□□□□ -0.66
VRK3-219ENST00000600137 SH2D7A6NKC9 451 aaPredicted RBP10.92□□□□□ -0.66
VRK3-219ENST00000600137 M0R1X1 148 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 CD74P04233 296 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 CD3DP04234 171 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 CRYBA1P05813 215 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 ZNF735P0CB33 412 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 TMEM11P17152 192 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 CNTFRP26992 372 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 PROK1P58294 105 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 TAS2R46P59540 309 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 KRTAP10-3P60369 221 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 ACTBP60709 375 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 RPL30P62888 115 aaKnown RBP10.92□□□□□ -0.66
VRK3-219ENST00000600137 SSBP1Q04837 148 aaKnown RBP10.92□□□□□ -0.66
VRK3-219ENST00000600137 HES1Q14469 280 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 VAX1Q5SQQ9 334 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 FAM131AQ6UXB0 335 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 ZNF645Q8N7E2 425 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 C5orf56Q8N8D9 126 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 Q8N9W7 124 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 TMEM229BQ8NBD8 167 aa10.92□□□□□ -0.66
VRK3-219ENST00000600137 OR4D10Q8NGI6 311 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms