RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ISOC1Q96CN7 298 aa12.07□□□□□ -0.48
LIG1-219ENST00000600055 C5orf30Q96GV9 206 aa12.07□□□□□ -0.48
LIG1-219ENST00000600055 OR2D2Q9H210 308 aa12.07□□□□□ -0.48
LIG1-219ENST00000600055 ZNF221Q9UK13 617 aa12.07□□□□□ -0.48
LIG1-219ENST00000600055 J3QRK9 145 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 PEX14O75381 377 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 CD28P10747 220 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 NFYAP23511 347 aaPredicted RBP12.06□□□□□ -0.48
LIG1-219ENST00000600055 TMEM69Q5SWH9 247 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 CNIH2Q6PI25 160 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 FAM131AQ6UXB0 335 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 WIPF2Q8TF74 440 aaPredicted RBP12.06□□□□□ -0.48
LIG1-219ENST00000600055 ACOT12Q8WYK0 555 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 AP3S1Q92572 193 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 GHITMQ9H3K2 345 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 ANXA10Q9UJ72 324 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
LIG1-219ENST00000600055 LINC01548A6NM66 108 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 H0YJW9 148 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 ZNF182P17025 639 aaPredicted RBP12.05□□□□□ -0.48
LIG1-219ENST00000600055 ELK1P19419 428 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 ACTBP60709 375 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 C10orf99Q6UWK7 81 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 HOGA1Q86XE5 327 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 ZNF383Q8NA42 475 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 BEST4Q8NFU0 473 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 SDHAF2Q9NX18 166 aa12.05□□□□□ -0.48
LIG1-219ENST00000600055 RBM7Q9Y580 266 aaKnown RBP12.05□□□□□ -0.48
LIG1-219ENST00000600055 M0R1X1 148 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 HLA-DQB1P01920 261 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 APOA1P02647 267 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 CTXN2P0C2S0 81 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 MMDQ15546 238 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 MZT2AQ6P582 158 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 FAM71E2Q8N5Q1 922 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 SNAPC3Q92966 411 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 CMTM3Q96MX0 182 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 NOL4LQ96MY1 436 aaPredicted RBP12.04□□□□□ -0.48
LIG1-219ENST00000600055 RASL11BQ9BPW5 248 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 LIN7CQ9NUP9 197 aaKnown RBP12.04□□□□□ -0.48
LIG1-219ENST00000600055 LINC00527Q9UJ94 153 aa12.04□□□□□ -0.48
LIG1-219ENST00000600055 MRPS7Q9Y2R9 242 aaKnown RBP12.04□□□□□ -0.48
LIG1-219ENST00000600055 IGKV1D-13A0A0B4J2D9 117 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 DPPA5A6NC42 116 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 OR5H14A6NHG9 310 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 H3BMQ9 156 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 FBXO24O75426 580 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 IGHG2P01859 326 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 IGKV1-13P0DP09 117 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 ARPC4P59998 168 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 PRR31Q5SQ13 230 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 SLC35E3Q7Z769 313 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 CENPVQ7Z7K6 275 aaPredicted RBP12.03□□□□□ -0.48
LIG1-219ENST00000600055 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.03□□□□□ -0.48
LIG1-219ENST00000600055 OR5AU1Q8NGC0 362 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 OR8H1Q8NGG4 311 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 OR5AN1Q8NGI8 311 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 GAB2Q9UQC2 676 aa12.03□□□□□ -0.48
LIG1-219ENST00000600055 FAM25AB3EWG3 89 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 FAM25CB3EWG5 89 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 FAM25GB3EWG6 89 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 H7C2Y5 167 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 NBR2O15453 112 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 MC5RP33032 325 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 CBX5P45973 191 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 SNX29P2Q8IUI4 249 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 CITED2Q99967 270 aaPredicted RBP12.02□□□□□ -0.49
LIG1-219ENST00000600055 IFT46Q9NQC8 304 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 WASHC3Q9Y3C0 194 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 OR2W1Q9Y3N9 320 aa12.02□□□□□ -0.49
LIG1-219ENST00000600055 M0QZ24 198 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 TUSC2O75896 110 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 TSPAN15O95858 294 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 IGKV1-16P04430 117 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 PRSS3P35030 304 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 LUMP51884 338 aaPredicted RBP12.01□□□□□ -0.49
LIG1-219ENST00000600055 TCTEX1D4Q5JR98 221 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 ZNF329Q86UD4 541 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 NPBQ8NG41 125 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 DYNC2LI1Q8TCX1 351 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 RBM38Q9H0Z9 239 aaKnown RBP12.01□□□□□ -0.49
LIG1-219ENST00000600055 MIXL1Q9H2W2 232 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 CCDC59Q9P031 241 aaKnown RBP12.01□□□□□ -0.49
LIG1-219ENST00000600055 ANAPC10Q9UM13 185 aa12.01□□□□□ -0.49
LIG1-219ENST00000600055 CTDSP2O14595 271 aa12□□□□□ -0.49
LIG1-219ENST00000600055 NDUFA3O95167 84 aa12□□□□□ -0.49
LIG1-219ENST00000600055 APOA2P02652 100 aa12□□□□□ -0.49
LIG1-219ENST00000600055 OR5H8P0DN80 308 aa12□□□□□ -0.49
LIG1-219ENST00000600055 AADACP22760 399 aa12□□□□□ -0.49
LIG1-219ENST00000600055 FCGR2CP31995 323 aa12□□□□□ -0.49
LIG1-219ENST00000600055 C5orf64Q2M2E5 130 aa12□□□□□ -0.49
LIG1-219ENST00000600055 NSUN5P1Q3KNT7 163 aa12□□□□□ -0.49
LIG1-219ENST00000600055 OR5AP2Q8NGF4 316 aa12□□□□□ -0.49
LIG1-219ENST00000600055 GPX8Q8TED1 209 aa12□□□□□ -0.49
LIG1-219ENST00000600055 FBXL15Q9H469 300 aa12□□□□□ -0.49
LIG1-219ENST00000600055 SLC35D1Q9NTN3 355 aa12□□□□□ -0.49
LIG1-219ENST00000600055 NECAP2Q9NVZ3 263 aa12□□□□□ -0.49
LIG1-219ENST00000600055 ZNF107Q9UII5 783 aaPredicted RBP12□□□□□ -0.49
LIG1-219ENST00000600055 TRRAPQ9Y4A5 3859 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms