RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ELANEP08246 267 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 OR8U9P0C7N5 309 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 GSTT2P0CG29 244 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 GSTT2BP0CG30 244 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
LIG1-218ENST00000599322 CD40LGP29965 261 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 RPL23AP62750 156 aaKnown RBP11.16□□□□□ -0.62
LIG1-218ENST00000599322 PLA2G7Q13093 441 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 C5orf64Q2M2E5 130 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 HACD4Q5VWC8 232 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 C1QL4Q86Z23 238 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 OR8U1Q8NH10 309 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 ABHD5Q8WTS1 349 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 DPF1Q92782 380 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 ST6GALNAC5Q9BVH7 336 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 DCSTAMPQ9H295 470 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.16□□□□□ -0.62
LIG1-218ENST00000599322 RHBDL2Q9NX52 303 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 KCNK7Q9Y2U2 307 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 ADARB2-AS1A8MUL3 147 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 M0R1X1 148 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 HLA-DRB1P01911 266 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 CT45A6P0DMU7 189 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 CT45A5P0DMU8 189 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 CT45A7P0DMV0 189 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 RPS16P62249 146 aaKnown RBP11.15□□□□□ -0.62
LIG1-218ENST00000599322 TMEM267Q0VDI3 215 aaPredicted RBP11.15□□□□□ -0.62
LIG1-218ENST00000599322 FOXE3Q13461 319 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 TCTEX1D4Q5JR98 221 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 GLDNQ6ZMI3 551 aaPredicted RBP11.15□□□□□ -0.62
LIG1-218ENST00000599322 Q6ZS49 121 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 ZNF695Q8IW36 515 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 KLHL30-AS1Q8NEE0 82 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 NPBQ8NG41 125 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 FLYWCH2Q96CP2 140 aaKnown RBP11.15□□□□□ -0.62
LIG1-218ENST00000599322 AGMATQ9BSE5 352 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 CABLES2Q9BTV7 478 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 PARP11Q9NR21 331 aa11.15□□□□□ -0.62
LIG1-218ENST00000599322 ZNF230Q9UIE0 474 aaPredicted RBP11.15□□□□□ -0.62
LIG1-218ENST00000599322 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 TRBV6-7A0A0A0MS04 114 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 A0A0A6YYH2 397 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 A6NJ64 397 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 H0YJW9 148 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 RRHO14718 337 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 SLC22A5O76082 557 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 IGF1P05019 195 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 RRASP10301 218 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 MYCNOSP40205 109 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 RTL8BQ17RB0 113 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 IGSF11Q5DX21 431 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 ZNF660Q6AZW8 331 aaPredicted RBP11.14□□□□□ -0.63
LIG1-218ENST00000599322 C10orf99Q6UWK7 81 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 Q6ZPA2 131 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 REC114Q7Z4M0 266 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 NR2C2APQ86WQ0 139 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 PDPNQ86YL7 162 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 OR5AN1Q8NGI8 311 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 MAFIPQ8WZ33 124 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 RCC1LQ96I51 464 aaKnown RBP11.14□□□□□ -0.63
LIG1-218ENST00000599322 ADTRPQ96IZ2 230 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 MCRIP2Q9BUT9 160 aaKnown RBP11.14□□□□□ -0.63
LIG1-218ENST00000599322 TOLLIPQ9H0E2 274 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 PARP12Q9H0J9 701 aaKnown RBP11.14□□□□□ -0.63
LIG1-218ENST00000599322 OR2D2Q9H210 308 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 OR51J1Q9H342 316 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 ZMAT5Q9UDW3 170 aaKnown RBP11.14□□□□□ -0.63
LIG1-218ENST00000599322 ZNF580Q9UK33 172 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 GAB2Q9UQC2 676 aa11.14□□□□□ -0.63
LIG1-218ENST00000599322 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
LIG1-218ENST00000599322 LINC01548A6NM66 108 aa11.13□□□□□ -0.63
LIG1-218ENST00000599322 G3V4G9 280 aa11.13□□□□□ -0.63
LIG1-218ENST00000599322 SPDEFO95238 335 aa11.13□□□□□ -0.63
LIG1-218ENST00000599322 THBS3P49746 956 aa11.13□□□□□ -0.63
LIG1-218ENST00000599322 ARPC4P59998 168 aa11.13□□□□□ -0.63
LIG1-218ENST00000599322 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
LIG1-218ENST00000599322 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
LIG1-218ENST00000599322 S100A16Q96FQ6 103 aaKnown RBP11.13□□□□□ -0.63
LIG1-218ENST00000599322 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
LIG1-218ENST00000599322 METTL1Q9UBP6 276 aaKnown RBP11.13□□□□□ -0.63
LIG1-218ENST00000599322 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 TRAV41A0A0B4J266 112 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 TMEM235A6NFC5 223 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 NDUFA3O95167 84 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 IGHG4P01861 327 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 CLEC2LP0C7M8 214 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 CNTFRP26992 372 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
LIG1-218ENST00000599322 LGALS7P47929 136 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 LUMP51884 338 aaPredicted RBP11.12□□□□□ -0.63
LIG1-218ENST00000599322 OXLD1Q5BKU9 147 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 SAMD5Q5TGI4 173 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 C8orf86Q6ZUL3 223 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 TCTEX1D1Q8N7M0 179 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 FBXL15Q9H469 300 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
LIG1-218ENST00000599322 WSB1Q9Y6I7 421 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms