RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	S100A13	Q99584	98 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	CCDC32	Q9BV29	185 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	MRPL20	Q9BYC9	149 aa	Known RBP	11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	BANF2	Q9H503	90 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	ETAA1	Q9NY74	926 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	STEAP1	Q9UHE8	339 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	ZNF107	Q9UII5	783 aa	Predicted RBP	11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	ZNF580	Q9UK33	172 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	TRAPPC2L	Q9UL33	140 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	SPATA2	Q9UM82	520 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	SLC17A2	O00624	439 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	ATP6V0E1	O15342	81 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	SPINT2	O43291	252 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	LANCL1	O43813	399 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	ZNF780A	O75290	641 aa	Predicted RBP	11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	NHLRC4	P0CG21	123 aa	Predicted RBP	11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	PPIF	P30405	207 aa	Known RBP	11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	PITPNA	Q00169	270 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	NDP	Q00604	133 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	IL18	Q14116	193 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	MMD	Q15546	238 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	ZNF260	Q3ZCT1	412 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	CNIH2	Q6PI25	160 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	GLIPR1L1	Q6UWM5	242 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	LYPD6	Q86Y78	171 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	CDH26	Q8IXH8	852 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	OR11H1	Q8NG94	326 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	OR5B12	Q96R08	314 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	EXTL2	Q9UBQ6	330 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	ZMAT5	Q9UDW3	170 aa	Known RBP	11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	WSB1	Q9Y6I7	421 aa		11.41	□□□□□ -0.58
IRF3-223	ENST00000599223	MCRIP1	C9JLW8	97 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223		I3L521	148 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	SNRPB	P14678	240 aa	Known RBP	11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	HTR2C	P28335	458 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	PPP1CC	P36873	323 aa	Known RBP	11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	INPP1	P49441	399 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	DEFA1	P59665	94 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	DEFA3	P59666	94 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	PYDC2	Q56P42	97 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	C6orf183	Q5T699	404 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	AWAT2	Q6E213	333 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	GDPD1	Q8N9F7	314 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	OR52L2P	Q8NGH6	319 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	MRPL30	Q8TCC3	161 aa	Known RBP	11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	LGALS14	Q8TCE9	139 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	C15orf40	Q8WUR7	153 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	S100A16	Q96FQ6	103 aa	Known RBP	11.4	□□□□□ -0.58
IRF3-223	ENST00000599223		Q96M66	194 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	UQCC2	Q9BRT2	126 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	ABHD14A	Q9BUJ0	271 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	MIXL1	Q9H2W2	232 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	TAF9B	Q9HBM6	251 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	SPACA1	Q9HBV2	294 aa		11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	MBNL3	Q9NUK0	354 aa	Known RBP	11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.4	□□□□□ -0.58
IRF3-223	ENST00000599223	IGHV7-81	A0A0B4J1V7	117 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	UBE2QL1	A1L167	161 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	UPK1B	O75841	260 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	IGLV1-40	P01703	118 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	MGMT	P16455	207 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	ELK1	P19419	428 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	BLVRB	P30043	206 aa	Predicted RBP	11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	OR3A3	P47888	321 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	ACTB	P60709	375 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	RGS21	Q2M5E4	152 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	TMEM30B	Q3MIR4	351 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	MORN2	Q502X0	79 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	ZNF491	Q8N8L2	437 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	FAM46B	Q96A09	425 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	NABP2	Q9BQ15	211 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	SELENOI	Q9C0D9	397 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	ALX4	Q9H161	411 aa	Predicted RBP	11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	OR2S2	Q9NQN1	319 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	PARP11	Q9NR21	331 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	FBXO7	Q9Y3I1	522 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	TENM2	Q9NT68	2774 aa		11.39	□□□□□ -0.59
IRF3-223	ENST00000599223	SAA2-SAA4	A0A096LPE2	208 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	SOX15	O60248	233 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	HLA-DRB1	P01911	266 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	SAA2	P0DJI9	122 aa	Predicted RBP	11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	ARSB	P15848	533 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	GPR176	Q14439	515 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	C19orf54	Q5BKX5	351 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	TRIQK	Q629K1	86 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	PYHIN1	Q6K0P9	492 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	CASTOR1	Q8WTX7	329 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	FAM3D	Q96BQ1	224 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	MRPS24	Q96EL2	167 aa	Known RBP	11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	UBE2E2	Q96LR5	201 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	GFI1	Q99684	422 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	OR51J1	Q9H342	316 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223		V9GYH0	126 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	STARD9	Q9P2P6	4700 aa		11.38	□□□□□ -0.59
IRF3-223	ENST00000599223	FAM90A10P	A6NDY2	464 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	CRTAP	O75718	401 aa	Predicted RBP	11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	EIF4E	P06730	217 aa	Known RBP	11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	OR8U8	P0C7N1	319 aa		11.37	□□□□□ -0.59
IRF3-223	ENST00000599223	UBB	P0CG47	229 aa		11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms