RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 DEDD2Q8WXF8 326 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 GPR61Q9BZJ8 451 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 RAB9BQ9NP90 201 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 IDI2-AS1Q9NZ38 188 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 CSMD3Q7Z407 3707 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 TRBV6-7A0A0A0MS04 114 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 CD3DP04234 171 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 CTXN2P0C2S0 81 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 TBPP20226 339 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 HLA-DMAP28067 261 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 UBE2E1P51965 193 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 TAS2R46P59540 309 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 ERVFRD-1P60508 538 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 DYRK1AQ13627 763 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 CDK10Q15131 360 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 PLA1AQ53H76 456 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 ACTBL2Q562R1 376 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 LY6G6FQ5SQ64 297 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 TRIQKQ629K1 86 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 TOMM5Q8N4H5 51 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 UBALD1Q8TB05 177 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 TNFRSF14Q92956 283 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 GALMQ96C23 342 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 KIRREL1Q96J84 757 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 WNT10AQ9GZT5 417 aa11.08□□□□□ -0.64
SHKBP1-218ENST00000598907 A0A087X0M5 115 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 A0A1B0GX30 115 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 PLA2G10O15496 165 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 PMP2P02689 132 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 ZNF735P0CB33 412 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 IGHV1-8P0DP01 117 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 HRH1P35367 487 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 VDAC2P45880 294 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 CD83Q01151 205 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 STEAP3Q658P3 488 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 ZNF660Q6AZW8 331 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 STEAP1BQ6NZ63 245 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 LINC00482Q8N8I6 264 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 RBMXL1Q96E39 390 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 RCHY1Q96PM5 261 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 JPT1Q9UK76 154 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 RYR1P21817 5038 aa11.07□□□□□ -0.64
SHKBP1-218ENST00000598907 TCRBV4S1A1TA0A5B7 111 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 YPEL1O60688 119 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 TUSC2O75896 110 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 AKAIN1P0CW23 69 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 ZBTB25P24278 435 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 RFX2P48378 723 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 AP3S2P59780 193 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 ARPC4P59998 168 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 UTF1Q5T230 341 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 PRAMEF5Q5TYX0 476 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 NCR3LG1Q68D85 454 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 FAM53AQ6NSI3 398 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 DHRS11Q6UWP2 260 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 Q6ZS46 218 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 Q8N2B8 174 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 PRR18Q8N4B5 295 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 OR52L2PQ8NGH6 319 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 OR4D10Q8NGI6 311 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 OR5H2Q8NGV7 314 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 GIMAP1Q8WWP7 306 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 YPEL2Q96QA6 119 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 PRR25Q96S07 402 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 TINAGL1Q9GZM7 467 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 HRASLSQ9HDD0 168 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 ABCB10Q9NRK6 738 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 GFOD1Q9NXC2 390 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 OR1A1Q9P1Q5 309 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 SESN1Q9Y6P5 492 aa11.06□□□□□ -0.64
SHKBP1-218ENST00000598907 hCG_1809904A0A1W2PP81 198 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 A0A1W2PPE2 198 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 A0A1W2PR64 198 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 A0A1W2PRV1 198 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 M0QYG6 137 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 SDCBPO00560 298 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 BET1O15155 118 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 RAB3DO95716 219 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 OR5H8P0DN80 308 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 CD34P28906 385 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 OR3A3P47888 321 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 GNMTQ14749 295 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 MEF2DQ14814 521 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 Q3ZCU0 254 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 MORN2Q502X0 79 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 RNASE10Q5GAN6 216 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 ZNF57Q68EA5 555 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 HCP5Q6MZN7 132 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 H1FOOQ8IZA3 346 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 ZNF439Q8NDP4 499 aa11.05□□□□□ -0.64
SHKBP1-218ENST00000598907 OR10J5Q8NHC4 309 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms