RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 GNG12Q9UBI6 72 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 CACNG5Q9UF02 275 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 C17orf98A8MV24 154 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 F2RL2O00254 374 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 CHST1O43916 411 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 CD3EP07766 207 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 SLC25A6P12236 298 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 AGAP20933 346 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 AKR1C2P52895 323 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 B2MP61769 119 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 EWSR1Q01844 656 aaKnown RBP eCLIP14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 ODF3L1Q8IXM7 274 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 PLA2G2EQ9NZK7 142 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 JPT1Q9UK76 154 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 LINC00473A8K010 186 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 VSTM5A8MXK1 200 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 PROP1O75360 226 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 JTBO76095 146 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 CAV2P51636 162 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 ZNF134P52741 427 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 MSMO1Q15800 293 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 Q3ZCU0 254 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 NCOR1P1Q9H4R4 102 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 NDRG3Q9UGV2 375 aa14.11□□□□□ -0.15
SHKBP1-216ENST00000598201 LRRC30A6NM36 301 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 SIGLEC5O15389 551 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 FGF2P09038 288 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 PVALBP20472 110 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 PAX9P55771 341 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 ZNF816Q0VGE8 651 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 LURAP1LQ8IV03 231 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 ZNF295-AS1Q8N0V1 137 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 TCTEX1D2Q8WW35 142 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 EGLN1Q9GZT9 426 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 LYRM2Q9NU23 88 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 DSCAML1Q8TD84 2053 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 PIGBOS1A0A0B4J2F0 54 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 TMEM178BH3BS89 294 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 LGALS8O00214 317 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 YPEL1O60688 119 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 FBXO24O75426 580 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 CLDN1O95832 211 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 EIF5AP63241 154 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 TMEM252Q8N6L7 170 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 UBAC2Q8NBM4 344 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 OR1S2Q8NGQ3 325 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 RNF141Q8WVD5 230 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 CCL17Q92583 94 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 YPEL2Q96QA6 119 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 FAM234AQ9H0X4 552 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 DYNLRB1Q9NP97 96 aa14.1□□□□□ -0.15
SHKBP1-216ENST00000598201 A8MXK9 166 aa14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 TMPRSS2O15393 492 aa14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 CLDN14O95500 239 aa14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 APOBEC3AP31941 199 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 VAMP2P63027 116 aa14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 HSD17B13Q7Z5P4 300 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 SPAG16Q8N0X2 631 aa14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 EDARADDQ8WWZ3 215 aa14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 LEAP2Q969E1 77 aa14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 ARV1Q9H2C2 271 aa14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 ANKHD1Q8IWZ3 2542 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-216ENST00000598201 ARFGEF3Q5TH69 2177 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 KBTBD11-OT1A0A1B0GTJ5 212 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 WRBO00258 174 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 SLC31A2O15432 143 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 FCN3O75636 299 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 S1PR2O95136 353 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 RNF224P0DH78 156 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 G6PCP35575 357 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 CATR1Q13166 79 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 SWI5Q1ZZU3 235 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 LINC00052Q96N35 136 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 KCNJ16Q9NPI9 418 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 CLN8Q9UBY8 286 aa14.08□□□□□ -0.15
SHKBP1-216ENST00000598201 KRASP01116 189 aa14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 MMP9P14780 707 aa14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 GPR12P47775 334 aa14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 EFNB3Q15768 340 aa14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 ZNF66Q6ZN08 573 aa14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 EIF4E3Q8N5X7 224 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 IFI27L2Q9H2X8 130 aa14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 TMEM106BQ9NUM4 274 aa14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 CISD1Q9NZ45 108 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-216ENST00000598201 HELZ2Q9BYK8 2649 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 TRGV10A0A0A0MS01 117 aa14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 TRAV38-1A0A0B4J264 116 aa14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 P0C879 139 aa14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 NCR3LG1Q68D85 454 aa14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 LRRC20Q8TCA0 184 aa14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 HSD17B10Q99714 261 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 LPAR3Q9UBY5 353 aa14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 MMP24Q9Y5R2 645 aa14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 USP9XQ93008 2570 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 TANC2Q9HCD6 1990 aa14.07□□□□□ -0.16
SHKBP1-216ENST00000598201 PPIAL4EA0A075B759 164 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 A0A1W2PPE3 182 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 ZNF705EA8MWA4 302 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 PPIAL4DF5H284 164 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 TRIM77I1YAP6 450 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms