RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NUBP2Q9Y5Y2 271 aa9.8□□□□□ -0.84
SHKBP1-213ENST00000597325 IGKV1D-13A0A0B4J2D9 117 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 J3QR06 171 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 HSD17B6O14756 317 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 SLC31A2O15432 143 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 TCRBP04435 133 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 ARG1P05089 322 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 IGKV1-13P0DP09 117 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 DLX1P56177 255 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 PRB3Q04118 309 aaPredicted RBP9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 BAMBIQ13145 260 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 KLRD1Q13241 179 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 PLA1AQ53H76 456 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 TMED4Q7Z7H5 227 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 CMTM1Q8IZ96 169 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 LINC00311Q8N616 119 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF645Q8N7E2 425 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 MINDY2Q8NBR6 621 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 BEND2Q8NDZ0 799 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 LHX4Q969G2 390 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 CREB3L1Q96BA8 519 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 TBX15Q96SF7 602 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 C20orf85Q9H1P6 137 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 MMP28Q9H239 520 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 IFI27L2Q9H2X8 130 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 NUDT15Q9NV35 164 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 PIPOXQ9P0Z9 390 aa9.79□□□□□ -0.84
SHKBP1-213ENST00000597325 DOCK11Q5JSL3 2073 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 GPR31O00270 319 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 RAB29O14966 203 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 ARPC1BO15143 372 aaKnown RBP9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 CEACAM3P40198 252 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 LGALS4P56470 323 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 TAS2R31P59538 309 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 FOXL1Q12952 345 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 HLA-DRB5Q30154 266 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 CT45A1Q5HYN5 189 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 UTF1Q5T230 341 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 GPR157Q5UAW9 335 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 PDZD9Q8IXQ8 264 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 CENPSQ8N2Z9 138 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 TEX29Q8N6K0 151 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 CCDC71LQ8N9Z2 235 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 OR11H6Q8NGC7 330 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 CT45A3Q8NHU0 189 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 UPRTQ96BW1 309 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 ZNF486Q96H40 463 aaPredicted RBP9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 S1PR3Q99500 378 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 RSRP1Q9BUV0 290 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 GHITMQ9H3K2 345 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 RNF150Q9ULK6 438 aa9.78□□□□□ -0.84
SHKBP1-213ENST00000597325 KIAA2026Q5HYC2 2103 aa9.77□□□□□ -0.84
SHKBP1-213ENST00000597325 RYR2Q92736 4967 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 SAA2-SAA4A0A096LPE2 208 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 TRAV40A0A0B4J280 105 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 RNASEK-C17orf49H0YIS7 233 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 CTSDP07339 412 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 H2AFB2P0C5Z0 115 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 SAA2P0DJI9 122 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 HKR1P10072 659 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 UBE2E1P51965 193 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNF134P52741 427 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 MSMO1Q15800 293 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 PHLDA2Q53GA4 152 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNF626Q68DY1 528 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 C11orf88Q6PI97 169 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNF818PQ6ZRF7 136 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 ZBTB34Q8NCN2 500 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 DUSP18Q8NEJ0 188 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 MRGPRFQ96AM1 343 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 ABHD14BQ96IU4 210 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 AKR1E2Q96JD6 320 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 AGMATQ9BSE5 352 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 CCL28Q9NRJ3 127 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 VSIG4Q9Y279 399 aa9.77□□□□□ -0.85
SHKBP1-213ENST00000597325 A0A1W2PRD5 423 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 A0A1W2PRF3 423 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 A0A1W2PRM7 423 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 ODF3BA8MYP8 253 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 IGLV1-47P01700 117 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 PI3P19957 117 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 HTR1DP28221 377 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 PIGPP57054 158 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 CATR1Q13166 79 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 HCP5Q6MZN7 132 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 FAM71F2Q6NXP2 309 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 CCBE1Q6UXH8 406 aaPredicted RBP9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 LDLRAD3Q86YD5 345 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 DRAM1Q8N682 238 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 BVESQ8NE79 360 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 OR4P4Q8NGL7 312 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 CHPT1Q8WUD6 406 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 RPEQ96AT9 228 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 ESM1Q9NQ30 184 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 SLC2A9Q9NRM0 540 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 SDHAF2Q9NX18 166 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNRD1Q9P1U0 126 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 GPR132Q9UNW8 380 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms