RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ZNF45Q02386 682 aa12.45□□□□□ -0.42
SMCO4-206ENST00000596676 ZNF816Q0VGE8 651 aaPredicted RBP12.45□□□□□ -0.42
SMCO4-206ENST00000596676 KLF9Q13886 244 aaPredicted RBP12.45□□□□□ -0.42
SMCO4-206ENST00000596676 VAX1Q5SQQ9 334 aa12.45□□□□□ -0.42
SMCO4-206ENST00000596676 RBMS3Q6XE24 437 aaKnown RBP12.45□□□□□ -0.42
SMCO4-206ENST00000596676 TMEM17Q86X19 198 aa12.45□□□□□ -0.42
SMCO4-206ENST00000596676 TMEM219Q86XT9 240 aa12.45□□□□□ -0.42
SMCO4-206ENST00000596676 CAPSLQ8WWF8 208 aa12.45□□□□□ -0.42
SMCO4-206ENST00000596676 CHIAQ9BZP6 476 aa12.45□□□□□ -0.42
SMCO4-206ENST00000596676 SLC5A7Q9GZV3 580 aa12.45□□□□□ -0.42
SMCO4-206ENST00000596676 VGLL3A8MV65 326 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 TCF21O43680 179 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 AMY2AP04746 511 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 SNRNP70P08621 437 aaKnown RBP12.44□□□□□ -0.42
SMCO4-206ENST00000596676 CSF1P09603 554 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 AKAIN1P0CW23 69 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
SMCO4-206ENST00000596676 SCGB2A2Q13296 93 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 HNF4GQ14541 408 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 AADACL3Q5VUY0 350 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 GDPD1Q8N9F7 314 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 OR6F1Q8NGZ6 308 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 SSMEM1Q8WWF3 244 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 MRGPRFQ96AM1 343 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 RITA1Q96K30 269 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 PIPOXQ9P0Z9 390 aa12.44□□□□□ -0.42
SMCO4-206ENST00000596676 A6NDX4 124 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 LINC00473A8K010 186 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 OOSP1A8MZH6 123 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 TNFSF12O43508 249 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 IFNA6P05013 189 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 IL7P13232 177 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 HERV-K104P61576 105 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 RPL30P62888 115 aaKnown RBP12.43□□□□□ -0.42
SMCO4-206ENST00000596676 UBA52P62987 128 aaKnown RBP12.43□□□□□ -0.42
SMCO4-206ENST00000596676 SCGB2B2Q4G0G5 96 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 ACTBL2Q562R1 376 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 ZNF57Q68EA5 555 aaPredicted RBP12.43□□□□□ -0.42
SMCO4-206ENST00000596676 OR8H3Q8N146 312 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 TOMM5Q8N4H5 51 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 ZNF383Q8NA42 475 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 MOB3AQ96BX8 217 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 S1PR3Q99500 378 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 HRASLSQ9HDD0 168 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 ABCB10Q9NRK6 738 aa12.43□□□□□ -0.42
SMCO4-206ENST00000596676 FAM90A9PA6NNJ1 464 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 CHST1O43916 411 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 GNRHRP30968 328 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 LSAMPQ13449 338 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
SMCO4-206ENST00000596676 CCDC144NLQ6NUI1 221 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 ZNF818PQ6ZRF7 136 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 LINC00299Q6ZSB3 139 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 LHFPL1Q86WI0 220 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 ZNF645Q8N7E2 425 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 OR51S1Q8NGJ8 323 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 DPAGT1Q9H3H5 408 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 ZNF107Q9UII5 783 aaPredicted RBP12.42□□□□□ -0.42
SMCO4-206ENST00000596676 TCF19Q9Y242 345 aa12.42□□□□□ -0.42
SMCO4-206ENST00000596676 IFNA2P01563 188 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 PI3P19957 117 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 TBPP20226 339 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 BRS3P32247 399 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 DYNLT3P51808 116 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 PPP5CP53041 499 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 HES1Q14469 280 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 HABP2Q14520 560 aaPredicted RBP12.41□□□□□ -0.42
SMCO4-206ENST00000596676 AANATQ16613 207 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 TRIQKQ629K1 86 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 S100ZQ8WXG8 99 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 MCUBQ9NWR8 336 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 TAS2R8Q9NYW2 309 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 GAB2Q9UQC2 676 aa12.41□□□□□ -0.42
SMCO4-206ENST00000596676 SH2D7A6NKC9 451 aaPredicted RBP12.4□□□□□ -0.42
SMCO4-206ENST00000596676 H0YJW9 148 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 PLA2G10O15496 165 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 GPR137BO60478 399 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 CNTFRP26992 372 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 CD40LGP29965 261 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.42
SMCO4-206ENST00000596676 ZNF846Q147U1 533 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 MEF2DQ14814 521 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 PHLDA2Q53GA4 152 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 OR2B11Q5JQS5 317 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 FAM71F2Q6NXP2 309 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 ARRDC1Q8N5I2 433 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
SMCO4-206ENST00000596676 BVESQ8NE79 360 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 OR13C8Q8NGS7 320 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 MARCH1Q8TCQ1 289 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 EAF1Q96JC9 268 aaPredicted RBP12.4□□□□□ -0.42
SMCO4-206ENST00000596676 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
SMCO4-206ENST00000596676 A0A0A6YYJ9 748 aa12.39□□□□□ -0.43
SMCO4-206ENST00000596676 FAM181BA6NEQ2 426 aa12.39□□□□□ -0.43
SMCO4-206ENST00000596676 DISC1C4P0D8 188 aa12.39□□□□□ -0.43
SMCO4-206ENST00000596676 TXNL1O43396 289 aa12.39□□□□□ -0.43
SMCO4-206ENST00000596676 PGAM2P15259 253 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms