RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 STEAP3Q658P3 488 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 SFXN4Q6P4A7 337 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 MZT2AQ6P582 158 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 REC114Q7Z4M0 266 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 MFSD4AQ8N468 514 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 FAM89BQ8N5H3 189 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 MYOZ3Q8TDC0 251 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 AP3S1Q92572 193 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 THRSPQ92748 146 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 AGMATQ9BSE5 352 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 MIXL1Q9H2W2 232 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 AKIP1Q9NQ31 210 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 RHBDL2Q9NX52 303 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 OR1A1Q9P1Q5 309 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 AK3Q9UIJ7 227 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 KCNK7Q9Y2U2 307 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 RYR2Q92736 4967 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 hCG_2014768A0A024R1R8 64 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 IGHV7-81A0A0B4J1V7 117 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 H3BUI4 141 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 FCN1O00602 326 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 SOX15O60248 233 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 YPEL1O60688 119 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 HPGDSO60760 199 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 IGHG4P01861 327 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 SCTP09683 121 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 CT45A6P0DMU7 189 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 CT45A5P0DMU8 189 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 CT45A7P0DMV0 189 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 PSMB8P28062 276 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 BLVRBP30043 206 aaPredicted RBP8.17□□□□□ -1.1
LIG1-213ENST00000596672 PNLIPRP3Q17RR3 467 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 PLAC9Q5JTB6 97 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 LY6G6FQ5SQ64 297 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 GLDNQ6ZMI3 551 aaPredicted RBP8.17□□□□□ -1.1
LIG1-213ENST00000596672 ZNF695Q8IW36 515 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 LAX1Q8IWV1 398 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 ACOT12Q8WYK0 555 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 C5orf30Q96GV9 206 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 RCC1LQ96I51 464 aaKnown RBP8.17□□□□□ -1.1
LIG1-213ENST00000596672 ABHD14BQ96IU4 210 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 YPEL2Q96QA6 119 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 ABHD14AQ9BUJ0 271 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 TMEM59Q9BXS4 323 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 GNB4Q9HAV0 340 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 JPT1Q9UK76 154 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 GAB2Q9UQC2 676 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 WSB1Q9Y6I7 421 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 V9GY05 133 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 SACSQ9NZJ4 4579 aa8.17□□□□□ -1.1
LIG1-213ENST00000596672 TRBV6-6A0A0A6YYG2 114 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 IFITM5A6NNB3 132 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 FAM25AB3EWG3 89 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 FAM25CB3EWG5 89 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 FAM25GB3EWG6 89 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 CCL24O00175 119 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 AP4M1O00189 453 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 ATP6V0E1O15342 81 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 IGF1P05019 195 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 CD3GP09693 182 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 MYCNOSP40205 109 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 LUMP51884 338 aaPredicted RBP8.16□□□□□ -1.1
LIG1-213ENST00000596672 ACTBP60709 375 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 TRIM16LQ309B1 348 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 MOGAT2Q3SYC2 334 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 GLT8D1Q68CQ7 371 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 CENPSQ8N2Z9 138 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 OR51D1Q8NGF3 324 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 OR5H6Q8NGV6 325 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 CASTOR1Q8WTX7 329 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 ARHGAP5-AS1Q96IT6 56 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 ZFP57Q9NU63 452 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 GHRLQ9UBU3 117 aa8.16□□□□□ -1.1
LIG1-213ENST00000596672 SLC17A2O00624 439 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 NDUFA3O95167 84 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 BPNT1O95861 308 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 IGLV1-40P01703 118 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 UBBP0CG47 229 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 ELK1P19419 428 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 IL3RAP26951 378 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 CDX1P47902 265 aaPredicted RBP8.15□□□□□ -1.1
LIG1-213ENST00000596672 BCAP31P51572 246 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 PSMD7P51665 324 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
LIG1-213ENST00000596672 FOXE3Q13461 319 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 FHL3Q13643 280 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 KIR2DS1Q14954 304 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 C5orf64Q2M2E5 130 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 C2orf76Q3KRA6 126 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 TMEM30BQ3MIR4 351 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 SPANXN2Q5MJ10 180 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 TEX38Q6PEX7 206 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 FAM131AQ6UXB0 335 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 CCDC190Q86UF4 302 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 FOXRED2Q8IWF2 684 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 SAMD12Q8N8I0 201 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 NPBQ8NG41 125 aa8.15□□□□□ -1.1
LIG1-213ENST00000596672 OR6M1Q8NGM8 313 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms