RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 TM2D1Q9BX74 207 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 PLCXD1Q9NUJ7 323 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 FKBP14Q9NWM8 211 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 METTL1Q9UBP6 276 aaKnown RBP12.36□□□□□ -0.43
LIM2-202ENST00000596399 WASHC3Q9Y3C0 194 aa12.36□□□□□ -0.43
LIM2-202ENST00000596399 SLC22A1O15245 554 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 CA2P00918 260 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 SCTP09683 121 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 SRMP19623 302 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 P2RY14Q15391 338 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 CD200R1LQ6Q8B3 271 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 ZNF383Q8NA42 475 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 RHOVQ96L33 236 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 GFI1Q99684 422 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 LYSTQ99698 3801 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 LPAR5Q9H1C0 372 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 PLEKHJ1Q9NW61 149 aa12.35□□□□□ -0.43
LIM2-202ENST00000596399 IGKV1-6A0A0C4DH72 117 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
LIM2-202ENST00000596399 HSPB1P04792 205 aaKnown RBP12.34□□□□□ -0.43
LIM2-202ENST00000596399 OR8U9P0C7N5 309 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 MC5RP33032 325 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 SSBP2P81877 361 aaPredicted RBP12.34□□□□□ -0.43
LIM2-202ENST00000596399 PITPNAQ00169 270 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 DEFA5Q01523 94 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 TMEM267Q0VDI3 215 aaPredicted RBP12.34□□□□□ -0.43
LIM2-202ENST00000596399 RCN1Q15293 331 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 AKIRIN2Q53H80 203 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 ZFAND6Q6FIF0 208 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 ZNF562Q6V9R5 426 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 Q8N1Y9 231 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 TCTEX1D1Q8N7M0 179 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 GRPEL2Q8TAA5 225 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 OR4C12Q96R67 309 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 GHITMQ9H3K2 345 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 LSM2Q9Y333 95 aaKnown RBP12.34□□□□□ -0.43
LIM2-202ENST00000596399 HYDINQ4G0P3 5121 aa12.34□□□□□ -0.43
LIM2-202ENST00000596399 PTGES3LE9PB15 166 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 EBAG9O00559 213 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 TRGV3P03979 118 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 CD37P11049 281 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 LYL1P12980 280 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 CPEP16870 476 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 TMEM50BP56557 158 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 RPS16P62249 146 aaKnown RBP12.33□□□□□ -0.44
LIM2-202ENST00000596399 HLA-DRB3P79483 266 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 PJVKQ0ZLH3 352 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 HSD17B12Q53GQ0 312 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 MS4A15Q8N5U1 240 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 OR5T1Q8NG75 326 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 PHYHIPQ92561 330 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 THRSPQ92748 146 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 TMEM203Q969S6 136 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 RSRP1Q9BUV0 290 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 ZNF355PQ9NSJ1 428 aa12.33□□□□□ -0.44
LIM2-202ENST00000596399 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 ANKRD34BA5PLL1 514 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 FOXI3A8MTJ6 420 aaPredicted RBP12.32□□□□□ -0.44
LIM2-202ENST00000596399 HSPA12AO43301 675 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 SLC25A17O43808 307 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 RBBP9O75884 186 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 BPNT1O95861 308 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 CDK1P06493 297 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 CD3GP09693 182 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 UCHL1P09936 223 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 IGHV4-30-4P0DP06 118 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 ZBTB25P24278 435 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 CLDN12P56749 244 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 PLA2G7Q13093 441 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 FXYD3Q14802 87 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 PYHIN1Q6K0P9 492 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 MOB1BQ7L9L4 216 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 FAM89BQ8N5H3 189 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
LIM2-202ENST00000596399 ARHGAP5-AS1Q96IT6 56 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 MND1Q9BWT6 205 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 Q9N2K0 584 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 ADAM30Q9UKF2 790 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 DNAH1Q9P2D7 4330 aa12.32□□□□□ -0.44
LIM2-202ENST00000596399 ITGB1BP1O14713 200 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 TFAP2AP05549 437 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 VEGFCP49767 419 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 SPHARQ15513 63 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 OGFRL1Q5TC84 451 aaPredicted RBP12.31□□□□□ -0.44
LIM2-202ENST00000596399 LIPKQ5VXJ0 399 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 OR6M1Q8NGM8 313 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 RNF5Q99942 180 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 RIMS4Q9H426 269 aaPredicted RBP12.31□□□□□ -0.44
LIM2-202ENST00000596399 C8orf4Q9NR00 106 aa12.31□□□□□ -0.44
LIM2-202ENST00000596399 AK6Q9Y3D8 172 aaKnown RBP12.31□□□□□ -0.44
LIM2-202ENST00000596399 IGLV1-51P01701 117 aa12.3□□□□□ -0.44
LIM2-202ENST00000596399 ARSBP15848 533 aa12.3□□□□□ -0.44
LIM2-202ENST00000596399 RPS25P62851 125 aaKnown RBP12.3□□□□□ -0.44
LIM2-202ENST00000596399 MED22Q15528 200 aa12.3□□□□□ -0.44
LIM2-202ENST00000596399 PLAC9Q5JTB6 97 aa12.3□□□□□ -0.44
LIM2-202ENST00000596399 EDARADDQ8WWZ3 215 aa12.3□□□□□ -0.44
LIM2-202ENST00000596399 PTX4Q96A99 478 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms